RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 GNAI1P63096 354 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 CBX1P83916 185 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 GIMAP7Q8NHV1 300 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
TRAF3-201ENST00000347662 TAF3Q5VWG9 929 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 PRKAR2BP31323 418 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 PDZRN4Q6ZMN7 1036 aaPredicted RBP14□□□□□ -0.17
TRAF3-201ENST00000347662 KIF6Q6ZMV9 814 aa14□□□□□ -0.17
TRAF3-201ENST00000347662 CABP4P57796 275 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 PPM1EQ8WY54 764 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
TRAF3-201ENST00000347662 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 CA8P35219 290 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 API5Q9BZZ5 524 aaKnown RBP13.99□□□□□ -0.17
TRAF3-201ENST00000347662 CD109Q6YHK3 1445 aa13.99□□□□□ -0.17
TRAF3-201ENST00000347662 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
TRAF3-201ENST00000347662 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
TRAF3-201ENST00000347662 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
TRAF3-201ENST00000347662 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
TRAF3-201ENST00000347662 RABEP1Q15276 862 aa13.98□□□□□ -0.17
TRAF3-201ENST00000347662 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
TRAF3-201ENST00000347662 DRC1Q96MC2 740 aa13.97□□□□□ -0.17
TRAF3-201ENST00000347662 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
TRAF3-201ENST00000347662 MYL6BP14649 208 aa13.97□□□□□ -0.17
TRAF3-201ENST00000347662 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
TRAF3-201ENST00000347662 LUC7LQ9NQ29 371 aaKnown RBP13.97□□□□□ -0.17
TRAF3-201ENST00000347662 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 TRIM5Q9C035 493 aa13.96□□□□□ -0.17
TRAF3-201ENST00000347662 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 ZNF530Q6P9A1 599 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 FAM177A1Q8N128 213 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 DDX19BQ9UMR2 479 aa13.96□□□□□ -0.17
TRAF3-201ENST00000347662 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 GAS2L2Q8NHY3 880 aa13.96□□□□□ -0.17
TRAF3-201ENST00000347662 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
TRAF3-201ENST00000347662 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-201ENST00000347662 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
TRAF3-201ENST00000347662 CCDC66A2RUB6 948 aa13.96□□□□□ -0.18
TRAF3-201ENST00000347662 CDK13Q14004 1512 aaKnown RBP13.96□□□□□ -0.18
TRAF3-201ENST00000347662 ZWINTO95229 277 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
TRAF3-201ENST00000347662 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 TBC1D2BQ9UPU7 963 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 LNPKQ9C0E8 428 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 ERBINQ96RT1 1412 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
TRAF3-201ENST00000347662 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAF3-201ENST00000347662 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 FOXO3O43524 673 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 ADAMTS8Q9UP79 889 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 ZSCAN29Q8IWY8 852 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-201ENST00000347662 ERC2O15083 957 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 ZNF76P36508 570 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 RRP1P56182 461 aaKnown RBP13.94□□□□□ -0.18
TRAF3-201ENST00000347662 GSE1Q14687 1217 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 TICAM2Q86XR7 235 aa13.94□□□□□ -0.18
TRAF3-201ENST00000347662 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
TRAF3-201ENST00000347662 FBXO31Q5XUX0 539 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-201ENST00000347662 TCP11L2Q8N4U5 519 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 SPC24Q8NBT2 197 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 DNAI2Q9GZS0 605 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 SERPINC1P01008 464 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
TRAF3-201ENST00000347662 STIM1Q13586 685 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 NGLY1Q96IV0 654 aa13.93□□□□□ -0.18
TRAF3-201ENST00000347662 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
TRAF3-201ENST00000347662 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 PABPN1LA6NDY0 278 aaKnown RBP13.92□□□□□ -0.18
TRAF3-201ENST00000347662 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
TRAF3-201ENST00000347662 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 PANK1Q8TE04 598 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-201ENST00000347662 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
TRAF3-201ENST00000347662 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
TRAF3-201ENST00000347662 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
TRAF3-201ENST00000347662 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
TRAF3-201ENST00000347662 CCP110O43303 1012 aa13.91□□□□□ -0.18
TRAF3-201ENST00000347662 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
TRAF3-201ENST00000347662 CENPQQ7L2Z9 268 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-201ENST00000347662 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
TRAF3-201ENST00000347662 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
TRAF3-201ENST00000347662 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
TRAF3-201ENST00000347662 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
TRAF3-201ENST00000347662 JAKMIP3Q5VZ66 844 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms