RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LARP6Q9BRS8 491 aaKnown RBP16.54■□□□□ 0.24
CASC4-202ENST00000345795 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
CASC4-202ENST00000345795 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
CASC4-202ENST00000345795 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
CASC4-202ENST00000345795 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
CASC4-202ENST00000345795 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
CASC4-202ENST00000345795 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
CASC4-202ENST00000345795 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
CASC4-202ENST00000345795 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
CASC4-202ENST00000345795 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
CASC4-202ENST00000345795 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
CASC4-202ENST00000345795 CLASP1Q7Z460 1538 aa16.52■□□□□ 0.24
CASC4-202ENST00000345795 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.24
CASC4-202ENST00000345795 EYA1Q99502 592 aa16.52■□□□□ 0.23
CASC4-202ENST00000345795 ANO2Q9NQ90 1003 aa16.52■□□□□ 0.23
CASC4-202ENST00000345795 VAMP4O75379 141 aa16.51■□□□□ 0.23
CASC4-202ENST00000345795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
CASC4-202ENST00000345795 ATF3P18847 181 aa16.51■□□□□ 0.23
CASC4-202ENST00000345795 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
CASC4-202ENST00000345795 IQGAP3Q86VI3 1631 aa16.51■□□□□ 0.23
CASC4-202ENST00000345795 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
CASC4-202ENST00000345795 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
CASC4-202ENST00000345795 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
CASC4-202ENST00000345795 IL13P35225 146 aa16.5■□□□□ 0.23
CASC4-202ENST00000345795 NUTM1Q86Y26 1132 aa16.49■□□□□ 0.23
CASC4-202ENST00000345795 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
CASC4-202ENST00000345795 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
CASC4-202ENST00000345795 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
CASC4-202ENST00000345795 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
CASC4-202ENST00000345795 ROBO2Q9HCK4 1378 aa16.47■□□□□ 0.23
CASC4-202ENST00000345795 RAPGEF4Q8WZA2 1011 aa16.47■□□□□ 0.23
CASC4-202ENST00000345795 HMMRO75330 724 aa16.47■□□□□ 0.23
CASC4-202ENST00000345795 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
CASC4-202ENST00000345795 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
CASC4-202ENST00000345795 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
CASC4-202ENST00000345795 ABCC3O15438 1527 aa16.46■□□□□ 0.23
CASC4-202ENST00000345795 CEP152O94986 1710 aa16.46■□□□□ 0.22
CASC4-202ENST00000345795 UNC13BO14795 1591 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
CASC4-202ENST00000345795 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 EVA1CP58658 441 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 GSE1Q14687 1217 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
CASC4-202ENST00000345795 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 ABCC11Q96J66 1382 aa16.44■□□□□ 0.22
CASC4-202ENST00000345795 LRRFIP2Q9Y608 721 aaKnown RBP16.43■□□□□ 0.22
CASC4-202ENST00000345795 KCNQ3O43525 872 aa16.43■□□□□ 0.22
CASC4-202ENST00000345795 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
CASC4-202ENST00000345795 FGD1P98174 961 aa16.43■□□□□ 0.22
CASC4-202ENST00000345795 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
CASC4-202ENST00000345795 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
CASC4-202ENST00000345795 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
CASC4-202ENST00000345795 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
CASC4-202ENST00000345795 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
CASC4-202ENST00000345795 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
CASC4-202ENST00000345795 FOSBP53539 338 aa16.41■□□□□ 0.22
CASC4-202ENST00000345795 TRMT2AQ8IZ69 625 aaKnown RBP16.41■□□□□ 0.22
CASC4-202ENST00000345795 SETD1BQ9UPS6 1966 aaKnown RBP16.41■□□□□ 0.22
CASC4-202ENST00000345795 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
CASC4-202ENST00000345795 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
CASC4-202ENST00000345795 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
CASC4-202ENST00000345795 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
CASC4-202ENST00000345795 FLIIQ13045 1269 aa16.4■□□□□ 0.22
CASC4-202ENST00000345795 ABCA6Q8N139 1617 aa16.4■□□□□ 0.22
CASC4-202ENST00000345795 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
CASC4-202ENST00000345795 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.22
CASC4-202ENST00000345795 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.22
CASC4-202ENST00000345795 KDM4AO75164 1064 aa16.39■□□□□ 0.21
CASC4-202ENST00000345795 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
CASC4-202ENST00000345795 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
CASC4-202ENST00000345795 HECW2Q9P2P5 1572 aa16.39■□□□□ 0.21
CASC4-202ENST00000345795 KDM5AP29375 1690 aaKnown RBP16.38■□□□□ 0.21
CASC4-202ENST00000345795 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 NEO1Q92859 1461 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 GNAI2P04899 355 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 MPNDQ8N594 471 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 SYNMO15061 1565 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 INSRP06213 1382 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
CASC4-202ENST00000345795 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 TET3O43151 1660 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 NEK4P51957 841 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 KIDINS220Q9ULH0 1771 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 GOLGA6L22H0YM25 854 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms