RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
TRIO-202ENST00000344204 RSPH14Q9UHP6 348 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 GBP6Q6ZN66 633 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 ZNHIT6Q9NWK9 470 aaKnown RBP16.04■□□□□ 0.16
TRIO-202ENST00000344204 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
TRIO-202ENST00000344204 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 IGSF3O75054 1194 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 MYRIPQ8NFW9 859 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 CCDC148Q8NFR7 591 aa16.03■□□□□ 0.16
TRIO-202ENST00000344204 A0A0G2JS52 829 aa16.03■□□□□ 0.16
TRIO-202ENST00000344204 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
TRIO-202ENST00000344204 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
TRIO-202ENST00000344204 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIO-202ENST00000344204 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
TRIO-202ENST00000344204 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIO-202ENST00000344204 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
TRIO-202ENST00000344204 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRIO-202ENST00000344204 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
TRIO-202ENST00000344204 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
TRIO-202ENST00000344204 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.16
TRIO-202ENST00000344204 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRIO-202ENST00000344204 GOLGA6L10A0A0M3HER8 536 aa16.02■□□□□ 0.15
TRIO-202ENST00000344204 CNTROBQ8N137 903 aa16.02■□□□□ 0.15
TRIO-202ENST00000344204 IFIT2P09913 472 aaKnown RBP16.02■□□□□ 0.15
TRIO-202ENST00000344204 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
TRIO-202ENST00000344204 MYO10Q9HD67 2058 aa16.01■□□□□ 0.15
TRIO-202ENST00000344204 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
TRIO-202ENST00000344204 CAVIN2O95810 425 aa16.01■□□□□ 0.15
TRIO-202ENST00000344204 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
TRIO-202ENST00000344204 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
TRIO-202ENST00000344204 ME1P48163 572 aa16.01■□□□□ 0.15
TRIO-202ENST00000344204 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
TRIO-202ENST00000344204 KIF5CO60282 957 aa16■□□□□ 0.15
TRIO-202ENST00000344204 BCAR3O75815 825 aa16■□□□□ 0.15
TRIO-202ENST00000344204 STK38Q15208 465 aa16■□□□□ 0.15
TRIO-202ENST00000344204 CCDC181Q5TID7 509 aa16■□□□□ 0.15
TRIO-202ENST00000344204 SCAPERQ9BY12 1400 aa16■□□□□ 0.15
TRIO-202ENST00000344204 CCDC184Q52MB2 194 aa16■□□□□ 0.15
TRIO-202ENST00000344204 JMYQ8N9B5 988 aa16■□□□□ 0.15
TRIO-202ENST00000344204 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
TRIO-202ENST00000344204 MYOM3Q5VTT5 1437 aa16■□□□□ 0.15
TRIO-202ENST00000344204 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
TRIO-202ENST00000344204 URI1O94763 535 aaPredicted RBP15.99■□□□□ 0.15
TRIO-202ENST00000344204 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
TRIO-202ENST00000344204 PAIP2Q9BPZ3 127 aaKnown RBP15.99■□□□□ 0.15
TRIO-202ENST00000344204 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
TRIO-202ENST00000344204 SETSIPP0DME0 302 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
TRIO-202ENST00000344204 CAPN2P17655 700 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 LRCH2Q5VUJ6 765 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
TRIO-202ENST00000344204 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
TRIO-202ENST00000344204 DACH1Q9UI36 760 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 RIPK4P57078 832 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
TRIO-202ENST00000344204 HMGB1P09429 215 aaKnown RBP15.97■□□□□ 0.15
TRIO-202ENST00000344204 CAMK4Q16566 473 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 PPM1EQ8WY54 764 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
TRIO-202ENST00000344204 MICALL1Q8N3F8 863 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 ZNF830Q96NB3 372 aaPredicted RBP15.97■□□□□ 0.15
TRIO-202ENST00000344204 MAGEC2Q9UBF1 373 aaPredicted RBP15.97■□□□□ 0.15
TRIO-202ENST00000344204 LARP1BQ659C4 914 aaKnown RBP15.97■□□□□ 0.15
TRIO-202ENST00000344204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRIO-202ENST00000344204 LIG1P18858 919 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 HSPA4P34932 840 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 STX1AQ16623 288 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 KRBA2Q6ZNG9 492 aa15.97■□□□□ 0.15
TRIO-202ENST00000344204 GOLGA6L9A6NEM1 432 aa15.96■□□□□ 0.15
TRIO-202ENST00000344204 EPS15P42566 896 aa15.96■□□□□ 0.15
TRIO-202ENST00000344204 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
TRIO-202ENST00000344204 HOMEZQ8IX15 550 aa15.96■□□□□ 0.15
TRIO-202ENST00000344204 CYP46A1Q9Y6A2 500 aa15.96■□□□□ 0.14
TRIO-202ENST00000344204 BRPF1P55201 1214 aaPredicted RBP15.96■□□□□ 0.14
TRIO-202ENST00000344204 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
TRIO-202ENST00000344204 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
TRIO-202ENST00000344204 GOLIM4O00461 696 aa15.95■□□□□ 0.14
TRIO-202ENST00000344204 CCDC150Q8NCX0 1101 aa15.95■□□□□ 0.14
TRIO-202ENST00000344204 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 SOX12O15370 315 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 MAP2K2P36507 400 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
TRIO-202ENST00000344204 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 A0A1B0GUA9 196 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 SRRTQ9BXP5 876 aaKnown RBP15.94■□□□□ 0.14
TRIO-202ENST00000344204 EBAG9O00559 213 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
TRIO-202ENST00000344204 RSRC1Q96IZ7 334 aaKnown RBP15.94■□□□□ 0.14
TRIO-202ENST00000344204 TMCO5BA8MYB1 307 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 SLU7O95391 586 aaKnown RBP15.94■□□□□ 0.14
TRIO-202ENST00000344204 TAX1BP1Q86VP1 789 aa15.94■□□□□ 0.14
TRIO-202ENST00000344204 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms