RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
CAPRIN1-201ENST00000341394 PSME1Q06323 249 aa13.27□□□□□ -0.29
CAPRIN1-201ENST00000341394 EMILIN1Q9Y6C2 1016 aa13.27□□□□□ -0.29
CAPRIN1-201ENST00000341394 ATF3P18847 181 aa13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 NSD2O96028 1365 aa13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 NOL8Q76FK4 1167 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-201ENST00000341394 FMN2Q9NZ56 1722 aa13.25□□□□□ -0.29
CAPRIN1-201ENST00000341394 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
CAPRIN1-201ENST00000341394 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
CAPRIN1-201ENST00000341394 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
CAPRIN1-201ENST00000341394 NLRP6P59044 892 aa13.24□□□□□ -0.29
CAPRIN1-201ENST00000341394 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
CAPRIN1-201ENST00000341394 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 PHF8Q9UPP1 1060 aa13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 USP6P35125 1406 aa13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 MARF1Q9Y4F3 1742 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-201ENST00000341394 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
CAPRIN1-201ENST00000341394 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
CAPRIN1-201ENST00000341394 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
CAPRIN1-201ENST00000341394 FOXO3O43524 673 aa13.22□□□□□ -0.29
CAPRIN1-201ENST00000341394 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
CAPRIN1-201ENST00000341394 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.29
CAPRIN1-201ENST00000341394 PEAK1Q9H792 1746 aa13.21□□□□□ -0.29
CAPRIN1-201ENST00000341394 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
CAPRIN1-201ENST00000341394 AMPHP49418 695 aa13.21□□□□□ -0.3
CAPRIN1-201ENST00000341394 ITPRIPQ8IWB1 547 aa13.21□□□□□ -0.3
CAPRIN1-201ENST00000341394 INSRP06213 1382 aa13.21□□□□□ -0.3
CAPRIN1-201ENST00000341394 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
CAPRIN1-201ENST00000341394 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-201ENST00000341394 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
CAPRIN1-201ENST00000341394 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 STRCQ7RTU9 1775 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 OVOS2A0A0J9YW53 1432 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 OVOS2Q6IE36 1432 aa13.19□□□□□ -0.3
CAPRIN1-201ENST00000341394 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 HMOX1P09601 288 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 ORAI2Q96SN7 254 aa13.18□□□□□ -0.3
CAPRIN1-201ENST00000341394 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
CAPRIN1-201ENST00000341394 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
CAPRIN1-201ENST00000341394 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
CAPRIN1-201ENST00000341394 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
CAPRIN1-201ENST00000341394 NWD1Q149M9 1564 aa13.17□□□□□ -0.3
CAPRIN1-201ENST00000341394 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
CAPRIN1-201ENST00000341394 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
CAPRIN1-201ENST00000341394 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
CAPRIN1-201ENST00000341394 GOLGA6L3A6NEY3 463 aa13.15□□□□□ -0.3
CAPRIN1-201ENST00000341394 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-201ENST00000341394 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
CAPRIN1-201ENST00000341394 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
CAPRIN1-201ENST00000341394 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
CAPRIN1-201ENST00000341394 MPNDQ8N594 471 aa13.15□□□□□ -0.31
CAPRIN1-201ENST00000341394 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.31
CAPRIN1-201ENST00000341394 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
CAPRIN1-201ENST00000341394 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
CAPRIN1-201ENST00000341394 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
CAPRIN1-201ENST00000341394 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
CAPRIN1-201ENST00000341394 DLG5Q8TDM6 1919 aa13.14□□□□□ -0.31
CAPRIN1-201ENST00000341394 BCAR3O75815 825 aa13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 IL13P35225 146 aa13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-201ENST00000341394 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
CAPRIN1-201ENST00000341394 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
CAPRIN1-201ENST00000341394 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CAPRIN1-201ENST00000341394 MSH6P52701 1360 aa13.11□□□□□ -0.31
CAPRIN1-201ENST00000341394 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
CAPRIN1-201ENST00000341394 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 RIPK4P57078 832 aa13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 THUMPD2Q9BTF0 503 aaKnown RBP13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
CAPRIN1-201ENST00000341394 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-201ENST00000341394 LTN1O94822 1766 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms