RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 CASQ1P31415 396 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 C1orf141Q5JVX7 400 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 TAF4BQ92750 862 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 COG3Q96JB2 828 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 HSPA4P34932 840 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 ME1P48163 572 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 FAM114A1Q8IWE2 563 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 GNAI3P08754 354 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
PKHD1-201ENST00000340994 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
PKHD1-201ENST00000340994 FAM193AP78312 1265 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 NAA15Q9BXJ9 866 aaKnown RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 TAOK3Q9H2K8 898 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SOX12O15370 315 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 VPS36Q86VN1 386 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 LNPKQ9C0E8 428 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 RBM28Q9NW13 759 aaKnown RBP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
PKHD1-201ENST00000340994 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.87
PKHD1-201ENST00000340994 CETN2P41208 172 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 VPS37DQ86XT2 251 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CTDP1Q9Y5B0 961 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SMARCC1Q92922 1105 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 KRT32Q14532 448 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 FOXD1Q16676 465 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 TTC5Q8N0Z6 440 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 NSRP1Q9H0G5 558 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
PKHD1-201ENST00000340994 CLCN1P35523 988 aa9.64□□□□□ -0.87
PKHD1-201ENST00000340994 KIF20AO95235 890 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CBX1P83916 185 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ALS2CR12Q96Q35 445 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FYCO1Q9BQS8 1478 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TUBBP07437 444 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SPA17Q15506 151 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 MYOM3Q5VTT5 1437 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ANKRD62A6NC57 917 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 PAK3O75914 559 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 WASF1Q92558 559 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FYB1O15117 783 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TEFQ10587 303 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 UBTFL1P0CB47 393 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CEP112Q8N8E3 955 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 SKIDA1Q1XH10 827 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 STMN4Q9H169 189 aaPredicted RBP9.63□□□□□ -0.87
PKHD1-201ENST00000340994 STK26Q9P289 416 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 CEP131Q9UPN4 1083 aa9.63□□□□□ -0.87
PKHD1-201ENST00000340994 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 IFFO1Q0D2I5 559 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 SYCE3A1L190 88 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 ANO10Q9NW15 660 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 A6NNZ2 444 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 TUBB8Q3ZCM7 444 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 AKNAQ7Z591 1439 aa9.62□□□□□ -0.87
PKHD1-201ENST00000340994 RSRC1Q96IZ7 334 aaKnown RBP9.62□□□□□ -0.87
PKHD1-201ENST00000340994 APAF1O14727 1248 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 RIPK4P57078 832 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 FGFR1OPO95684 399 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 MSL1Q68DK7 614 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TDO2P48775 406 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 NOL7Q9UMY1 257 aaKnown RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 TTC31Q49AM3 519 aaPredicted RBP9.61□□□□□ -0.87
PKHD1-201ENST00000340994 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 ARFGAP3Q9NP61 516 aa9.61□□□□□ -0.87
PKHD1-201ENST00000340994 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms