RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPATA31A7Q8IWB4 1347 aa18.07■□□□□ 0.48
ATXN3-201ENST00000340660 CABP2Q9NPB3 220 aa18.06■□□□□ 0.48
ATXN3-201ENST00000340660 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
ATXN3-201ENST00000340660 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
ATXN3-201ENST00000340660 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
ATXN3-201ENST00000340660 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
ATXN3-201ENST00000340660 BTG4Q9NY30 223 aa18.04■□□□□ 0.48
ATXN3-201ENST00000340660 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
ATXN3-201ENST00000340660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.02■□□□□ 0.483e-6■■□□□ 13.5
ATXN3-201ENST00000340660 ABCC5O15440 1437 aa18.01■□□□□ 0.47
ATXN3-201ENST00000340660 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
ATXN3-201ENST00000340660 APLP1P51693 650 aa18.01■□□□□ 0.47
ATXN3-201ENST00000340660 GPBP1L1Q9HC44 474 aaPredicted RBP18■□□□□ 0.47
ATXN3-201ENST00000340660 PCNTO95613 3336 aa17.98■□□□□ 0.47
ATXN3-201ENST00000340660 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
ATXN3-201ENST00000340660 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
ATXN3-201ENST00000340660 ARXQ96QS3 562 aa17.97■□□□□ 0.47
ATXN3-201ENST00000340660 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
ATXN3-201ENST00000340660 LCE2DQ5TA82 110 aaPredicted RBP17.96■□□□□ 0.47
ATXN3-201ENST00000340660 SLAIN1Q8ND83 568 aa17.96■□□□□ 0.47
ATXN3-201ENST00000340660 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
ATXN3-201ENST00000340660 KRT28Q7Z3Y7 464 aa17.95■□□□□ 0.46
ATXN3-201ENST00000340660 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
ATXN3-201ENST00000340660 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
ATXN3-201ENST00000340660 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
ATXN3-201ENST00000340660 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
ATXN3-201ENST00000340660 RGPD3A6NKT7 1758 aaPredicted RBP17.92■□□□□ 0.46
ATXN3-201ENST00000340660 RGPD4Q7Z3J3 1758 aa17.92■□□□□ 0.46
ATXN3-201ENST00000340660 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
ATXN3-201ENST00000340660 VGFO15240 615 aaPredicted RBP17.92■□□□□ 0.46
ATXN3-201ENST00000340660 JMYQ8N9B5 988 aa17.92■□□□□ 0.46
ATXN3-201ENST00000340660 ZNF526Q8TF50 670 aaPredicted RBP17.92■□□□□ 0.46
ATXN3-201ENST00000340660 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
ATXN3-201ENST00000340660 COL14A1Q05707 1796 aaKnown RBP17.91■□□□□ 0.46
ATXN3-201ENST00000340660 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
ATXN3-201ENST00000340660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.91■□□□□ 0.46
ATXN3-201ENST00000340660 ZFP91Q96JP5 570 aaPredicted RBP17.91■□□□□ 0.46
ATXN3-201ENST00000340660 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
ATXN3-201ENST00000340660 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
ATXN3-201ENST00000340660 DPY19L2Q6NUT2 758 aa17.89■□□□□ 0.45
ATXN3-201ENST00000340660 EFCAB3Q8N7B9 438 aa17.89■□□□□ 0.45
ATXN3-201ENST00000340660 FAM163AQ96GL9 167 aaPredicted RBP17.89■□□□□ 0.45
ATXN3-201ENST00000340660 L3MBTL3Q96JM7 780 aaPredicted RBP17.89■□□□□ 0.45
ATXN3-201ENST00000340660 ADCY9O60503 1353 aa17.89■□□□□ 0.45
ATXN3-201ENST00000340660 POTEMA6NI47 508 aa17.88■□□□□ 0.45
ATXN3-201ENST00000340660 PLSCR1O15162 318 aa17.88■□□□□ 0.45
ATXN3-201ENST00000340660 PDE3BQ13370 1112 aa17.88■□□□□ 0.45
ATXN3-201ENST00000340660 KIF3CO14782 793 aa17.87■□□□□ 0.45
ATXN3-201ENST00000340660 YBX3P16989 372 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATXN3-201ENST00000340660 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
ATXN3-201ENST00000340660 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.87■□□□□ 0.45
ATXN3-201ENST00000340660 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
ATXN3-201ENST00000340660 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
ATXN3-201ENST00000340660 LMOD2Q6P5Q4 547 aa17.85■□□□□ 0.45
ATXN3-201ENST00000340660 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
ATXN3-201ENST00000340660 TECPR2O15040 1411 aa17.84■□□□□ 0.45
ATXN3-201ENST00000340660 NAIPQ13075 1403 aa17.84■□□□□ 0.45
ATXN3-201ENST00000340660 ARHGEF10O15013 1369 aa17.84■□□□□ 0.45
ATXN3-201ENST00000340660 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
ATXN3-201ENST00000340660 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
ATXN3-201ENST00000340660 SBNO1A3KN83 1393 aa17.83■□□□□ 0.45
ATXN3-201ENST00000340660 SLC15A2Q16348 729 aa17.83■□□□□ 0.44
ATXN3-201ENST00000340660 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.44
ATXN3-201ENST00000340660 E9PCH4 1651 aa17.83■□□□□ 0.44
ATXN3-201ENST00000340660 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
ATXN3-201ENST00000340660 HTRA3P83110 453 aa17.82■□□□□ 0.44
ATXN3-201ENST00000340660 STK32BQ9NY57 414 aa17.82■□□□□ 0.44
ATXN3-201ENST00000340660 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
ATXN3-201ENST00000340660 PSME1Q06323 249 aa17.8■□□□□ 0.44
ATXN3-201ENST00000340660 C3orf67Q6ZVT6 689 aa17.8■□□□□ 0.44
ATXN3-201ENST00000340660 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
ATXN3-201ENST00000340660 DAPK1P53355 1430 aa17.8■□□□□ 0.44
ATXN3-201ENST00000340660 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
ATXN3-201ENST00000340660 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
ATXN3-201ENST00000340660 BARGINQ6ZT62 677 aa17.78■□□□□ 0.44
ATXN3-201ENST00000340660 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
ATXN3-201ENST00000340660 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
ATXN3-201ENST00000340660 FAM161AQ3B820 660 aa17.76■□□□□ 0.43
ATXN3-201ENST00000340660 BOLA1Q9Y3E2 137 aa17.76■□□□□ 0.43
ATXN3-201ENST00000340660 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
ATXN3-201ENST00000340660 RGL2O15211 777 aa17.74■□□□□ 0.43
ATXN3-201ENST00000340660 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
ATXN3-201ENST00000340660 FMN2Q9NZ56 1722 aa17.74■□□□□ 0.43
ATXN3-201ENST00000340660 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
ATXN3-201ENST00000340660 SOX12O15370 315 aa17.72■□□□□ 0.43
ATXN3-201ENST00000340660 PRDM11Q9NQV5 511 aa17.72■□□□□ 0.43
ATXN3-201ENST00000340660 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
ATXN3-201ENST00000340660 SBF2Q86WG5 1849 aa17.71■□□□□ 0.43
ATXN3-201ENST00000340660 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
ATXN3-201ENST00000340660 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
ATXN3-201ENST00000340660 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
ATXN3-201ENST00000340660 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
ATXN3-201ENST00000340660 NRXN1Q9ULB1 1477 aa17.7■□□□□ 0.42
ATXN3-201ENST00000340660 TOMM70O94826 608 aa17.7■□□□□ 0.42
ATXN3-201ENST00000340660 HSPA1AP0DMV8 641 aaKnown RBP17.7■□□□□ 0.42
ATXN3-201ENST00000340660 HSPA1BP0DMV9 641 aaKnown RBP17.7■□□□□ 0.42
ATXN3-201ENST00000340660 MS4A4AQ96JQ5 239 aa17.69■□□□□ 0.42
ATXN3-201ENST00000340660 C11orf95C9JLR9 678 aaPredicted RBP17.68■□□□□ 0.42
ATXN3-201ENST00000340660 ST18O60284 1047 aa17.68■□□□□ 0.42
ATXN3-201ENST00000340660 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms