RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
RRP1B-201ENST00000340648 RBM27Q9P2N5 1060 aaKnown RBP17.75■□□□□ 0.43
RRP1B-201ENST00000340648 HDAC1Q13547 482 aaPredicted RBP17.75■□□□□ 0.43
RRP1B-201ENST00000340648 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
RRP1B-201ENST00000340648 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 KLHL40Q2TBA0 621 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 TNMDQ9H2S6 317 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
RRP1B-201ENST00000340648 STK3Q13188 491 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 GPS2Q13227 327 aa17.74■□□□□ 0.43
RRP1B-201ENST00000340648 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
RRP1B-201ENST00000340648 NLRP6P59044 892 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 NAT10Q9H0A0 1025 aaKnown RBP17.73■□□□□ 0.43
RRP1B-201ENST00000340648 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
RRP1B-201ENST00000340648 KRT85P78386 507 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 NUCB1Q02818 461 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
RRP1B-201ENST00000340648 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 RPGRIP1LQ68CZ1 1315 aa17.73■□□□□ 0.43
RRP1B-201ENST00000340648 TRIM29Q14134 588 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
RRP1B-201ENST00000340648 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 RRAGDQ9NQL2 400 aaPredicted RBP17.72■□□□□ 0.43
RRP1B-201ENST00000340648 NEUROD6Q96NK8 337 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
RRP1B-201ENST00000340648 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
RRP1B-201ENST00000340648 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 MCM10Q7L590 875 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 CCDC112Q8NEF3 446 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 SMC2O95347 1197 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 APPP05067 770 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 TPM1P09493 284 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
RRP1B-201ENST00000340648 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
RRP1B-201ENST00000340648 PZPP20742 1482 aa17.71■□□□□ 0.42
RRP1B-201ENST00000340648 USP25Q9UHP3 1055 aa17.7■□□□□ 0.42
RRP1B-201ENST00000340648 MX1P20591 662 aa17.7■□□□□ 0.42
RRP1B-201ENST00000340648 LRRFIP1Q32MZ4 808 aaKnown RBP17.7■□□□□ 0.42
RRP1B-201ENST00000340648 FAM135AQ9P2D6 1515 aa17.7■□□□□ 0.42
RRP1B-201ENST00000340648 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
RRP1B-201ENST00000340648 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
RRP1B-201ENST00000340648 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
RRP1B-201ENST00000340648 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
RRP1B-201ENST00000340648 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
RRP1B-201ENST00000340648 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
RRP1B-201ENST00000340648 RTEL1-TNFRSF6BF6WH68 1400 aa17.69■□□□□ 0.42
RRP1B-201ENST00000340648 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
RRP1B-201ENST00000340648 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
RRP1B-201ENST00000340648 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
RRP1B-201ENST00000340648 TRDNQ13061 729 aa17.68■□□□□ 0.42
RRP1B-201ENST00000340648 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
RRP1B-201ENST00000340648 PDCL2Q8N4E4 241 aa17.68■□□□□ 0.42
RRP1B-201ENST00000340648 AKAP17AQ02040 695 aaKnown RBP17.68■□□□□ 0.42
RRP1B-201ENST00000340648 TSR1Q2NL82 804 aaKnown RBP17.68■□□□□ 0.42
RRP1B-201ENST00000340648 FERMT3Q86UX7 667 aa17.68■□□□□ 0.42
RRP1B-201ENST00000340648 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
RRP1B-201ENST00000340648 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
RRP1B-201ENST00000340648 CAMK4Q16566 473 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 F6X3S4 739 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 HIP1O00291 1037 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 CBX1P83916 185 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 PDILTQ8N807 584 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 CCDC183Q5T5S1 534 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 SNX21Q969T3 373 aa17.67■□□□□ 0.42
RRP1B-201ENST00000340648 KDM4AO75164 1064 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 SIL1Q9H173 461 aa17.66■□□□□ 0.42
RRP1B-201ENST00000340648 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
RRP1B-201ENST00000340648 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
RRP1B-201ENST00000340648 NOS1P29475 1434 aa17.65■□□□□ 0.42
RRP1B-201ENST00000340648 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
RRP1B-201ENST00000340648 LARP6Q9BRS8 491 aaKnown RBP17.65■□□□□ 0.42
RRP1B-201ENST00000340648 PSME1Q06323 249 aa17.64■□□□□ 0.42
RRP1B-201ENST00000340648 TSHZ3Q63HK5 1081 aa17.64■□□□□ 0.42
RRP1B-201ENST00000340648 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.42
RRP1B-201ENST00000340648 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
RRP1B-201ENST00000340648 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 PIK3C2GO75747 1445 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 RAB3GAP1Q15042 981 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 FILIP1Q7Z7B0 1213 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms