RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■□□□ 12.3
BRPF3-201ENST00000339717 CUX2O14529 1486 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 SEPT14Q6ZU15 432 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 H3BQV1 296 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 DBN1Q16643 649 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 CEP57Q86XR8 500 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 KIF3CO14782 793 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 TMEM51Q9NW97 253 aa14.9□□□□□ -0.02
BRPF3-201ENST00000339717 HSPA4P34932 840 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 ZSCAN12O43309 604 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 BAG4O95429 457 aaKnown RBP14.89□□□□□ -0.03
BRPF3-201ENST00000339717 CCDC97Q96F63 343 aaPredicted RBP14.89□□□□□ -0.03
BRPF3-201ENST00000339717 TBC1D32Q96NH3 1257 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 ANAPC15P60006 121 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 DNAJC21Q5F1R6 531 aaKnown RBP14.89□□□□□ -0.03
BRPF3-201ENST00000339717 CEP112Q8N8E3 955 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 VEZTQ9HBM0 779 aa14.89□□□□□ -0.03
BRPF3-201ENST00000339717 RIOK3O14730 519 aaKnown RBP14.88□□□□□ -0.03
BRPF3-201ENST00000339717 EIF5P55010 431 aaKnown RBP14.88□□□□□ -0.03
BRPF3-201ENST00000339717 ZKSCAN8Q15776 578 aaPredicted RBP14.88□□□□□ -0.03
BRPF3-201ENST00000339717 RGL3Q3MIN7 710 aa14.88□□□□□ -0.03
BRPF3-201ENST00000339717 IQCEQ6IPM2 695 aa14.88□□□□□ -0.03
BRPF3-201ENST00000339717 RBM33Q96EV2 1170 aaKnown RBP14.88□□□□□ -0.03
BRPF3-201ENST00000339717 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
BRPF3-201ENST00000339717 RLBP1P12271 317 aa14.87□□□□□ -0.03
BRPF3-201ENST00000339717 MCTP2Q6DN12 878 aa14.87□□□□□ -0.03
BRPF3-201ENST00000339717 URI1O94763 535 aaPredicted RBP14.87□□□□□ -0.03
BRPF3-201ENST00000339717 OTUD6BQ8N6M0 293 aa14.87□□□□□ -0.03
BRPF3-201ENST00000339717 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
BRPF3-201ENST00000339717 ERLIN2O94905 339 aa14.87□□□□□ -0.03
BRPF3-201ENST00000339717 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
BRPF3-201ENST00000339717 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
BRPF3-201ENST00000339717 GSDMDP57764 484 aa14.86□□□□□ -0.03
BRPF3-201ENST00000339717 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
BRPF3-201ENST00000339717 TCHPQ9BT92 498 aa14.86□□□□□ -0.03
BRPF3-201ENST00000339717 TNMDQ9H2S6 317 aa14.86□□□□□ -0.03
BRPF3-201ENST00000339717 RIPK4P57078 832 aa14.86□□□□□ -0.03
BRPF3-201ENST00000339717 SSFA2P28290 1259 aa14.85□□□□□ -0.03
BRPF3-201ENST00000339717 SNW1Q13573 536 aaKnown RBP14.85□□□□□ -0.03
BRPF3-201ENST00000339717 TACO1Q9BSH4 297 aaKnown RBP14.85□□□□□ -0.03
BRPF3-201ENST00000339717 TUBB4BP68371 445 aa14.85□□□□□ -0.03
BRPF3-201ENST00000339717 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
BRPF3-201ENST00000339717 HOOK1Q9UJC3 728 aaKnown RBP14.85□□□□□ -0.03
BRPF3-201ENST00000339717 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
BRPF3-201ENST00000339717 CBFA2T2O43439 604 aa14.84□□□□□ -0.03
BRPF3-201ENST00000339717 ZNHIT6Q9NWK9 470 aaKnown RBP14.84□□□□□ -0.03
BRPF3-201ENST00000339717 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
BRPF3-201ENST00000339717 KIF5BP33176 963 aa14.84□□□□□ -0.03
BRPF3-201ENST00000339717 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.03
BRPF3-201ENST00000339717 TAOK2Q9UL54 1235 aa14.83□□□□□ -0.03
BRPF3-201ENST00000339717 SFPQP23246 707 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRPF3-201ENST00000339717 SLC20A2Q08357 652 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 SYCP1Q15431 976 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 CLIP2Q9UDT6 1046 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 ZSCAN20P17040 1043 aaPredicted RBP14.83□□□□□ -0.04
BRPF3-201ENST00000339717 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 NUP62CLQ9H1M0 184 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 NBPF3Q9H094 633 aa14.83□□□□□ -0.04
BRPF3-201ENST00000339717 IRX1P78414 480 aaPredicted RBP14.82□□□□□ -0.04
BRPF3-201ENST00000339717 NEDD9Q14511 834 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.82□□□□□ -0.04
BRPF3-201ENST00000339717 APBB1O00213 710 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 INPP5BP32019 993 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 PDILTQ8N807 584 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
BRPF3-201ENST00000339717 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 ZNF445P59923 1031 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 TERF2Q15554 542 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 RRP15Q9Y3B9 282 aaKnown RBP14.82□□□□□ -0.04
BRPF3-201ENST00000339717 SMARCE1Q969G3 411 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 L3MBTL2Q969R5 705 aa14.82□□□□□ -0.04
BRPF3-201ENST00000339717 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 FIBPO43427 364 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 B4GALNT4Q76KP1 1039 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 SUFUQ9UMX1 484 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 TUBBP07437 444 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 KINO60870 393 aaKnown RBP14.81□□□□□ -0.04
BRPF3-201ENST00000339717 CAVIN2O95810 425 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 C8orf34Q49A92 452 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 WWC2Q6AWC2 1192 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 VPS18Q9P253 973 aa14.81□□□□□ -0.04
BRPF3-201ENST00000339717 PDCP20941 246 aa14.8□□□□□ -0.04
BRPF3-201ENST00000339717 PRIM1P49642 420 aaKnown RBP14.8□□□□□ -0.04
BRPF3-201ENST00000339717 SH3BGRP55822 239 aaPredicted RBP14.8□□□□□ -0.04
BRPF3-201ENST00000339717 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
BRPF3-201ENST00000339717 EFCAB13Q8IY85 973 aa14.8□□□□□ -0.04
BRPF3-201ENST00000339717 CARMIL2Q6F5E8 1435 aa14.8□□□□□ -0.04
BRPF3-201ENST00000339717 HDAC1Q13547 482 aaPredicted RBP14.8□□□□□ -0.04
BRPF3-201ENST00000339717 PIK3R5Q8WYR1 880 aa14.8□□□□□ -0.04
BRPF3-201ENST00000339717 KIF3BO15066 747 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 RAB3GAP1Q15042 981 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 A6NNZ2 444 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 TUBB8Q3ZCM7 444 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 MMS22LQ6ZRQ5 1243 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms