RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
VMAC-201ENST00000339485 ZNF335Q9H4Z2 1342 aaPredicted RBP23.86■■□□□ 1.41
VMAC-201ENST00000339485 C1orf167Q5SNV9 1468 aa23.85■■□□□ 1.41
VMAC-201ENST00000339485 BCAR3O75815 825 aa23.84■■□□□ 1.41
VMAC-201ENST00000339485 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
VMAC-201ENST00000339485 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
VMAC-201ENST00000339485 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
VMAC-201ENST00000339485 MARF1Q9Y4F3 1742 aaKnown RBP23.84■■□□□ 1.41
VMAC-201ENST00000339485 DCCP43146 1447 aa23.84■■□□□ 1.41
VMAC-201ENST00000339485 ATF3P18847 181 aa23.84■■□□□ 1.41
VMAC-201ENST00000339485 APAF1O14727 1248 aa23.83■■□□□ 1.41
VMAC-201ENST00000339485 U2SURPO15042 1029 aaKnown RBP23.83■■□□□ 1.41
VMAC-201ENST00000339485 SOX12O15370 315 aa23.82■■□□□ 1.4
VMAC-201ENST00000339485 DIAPH1O60610 1272 aaKnown RBP23.82■■□□□ 1.4
VMAC-201ENST00000339485 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
VMAC-201ENST00000339485 USP19O94966 1318 aa23.82■■□□□ 1.4
VMAC-201ENST00000339485 MST1RQ04912 1400 aa23.82■■□□□ 1.4
VMAC-201ENST00000339485 KIF1AQ12756 1690 aa23.82■■□□□ 1.4
VMAC-201ENST00000339485 E9PSI1 815 aa23.81■■□□□ 1.4
VMAC-201ENST00000339485 LRRC7Q96NW7 1537 aa23.81■■□□□ 1.4
VMAC-201ENST00000339485 IGHDP01880 384 aa23.81■■□□□ 1.4
VMAC-201ENST00000339485 PSME1Q06323 249 aa23.81■■□□□ 1.4
VMAC-201ENST00000339485 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
VMAC-201ENST00000339485 USP54Q70EL1 1684 aa23.8■■□□□ 1.4
VMAC-201ENST00000339485 NLRP6P59044 892 aa23.8■■□□□ 1.4
VMAC-201ENST00000339485 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.8■■□□□ 1.4
VMAC-201ENST00000339485 MSH6P52701 1360 aa23.8■■□□□ 1.4
VMAC-201ENST00000339485 FOXO3O43524 673 aa23.8■■□□□ 1.4
VMAC-201ENST00000339485 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
VMAC-201ENST00000339485 PEAK1Q9H792 1746 aa23.78■■□□□ 1.4
VMAC-201ENST00000339485 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
VMAC-201ENST00000339485 XPCQ01831 940 aaPredicted RBP23.77■■□□□ 1.4
VMAC-201ENST00000339485 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
VMAC-201ENST00000339485 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
VMAC-201ENST00000339485 IQSEC2Q5JU85 1478 aa23.77■■□□□ 1.4
VMAC-201ENST00000339485 PDE3AQ14432 1141 aa23.76■■□□□ 1.39
VMAC-201ENST00000339485 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
VMAC-201ENST00000339485 TRPM3Q9HCF6 1732 aaPredicted RBP23.74■■□□□ 1.39
VMAC-201ENST00000339485 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
VMAC-201ENST00000339485 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
VMAC-201ENST00000339485 IL13P35225 146 aa23.72■■□□□ 1.39
VMAC-201ENST00000339485 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
VMAC-201ENST00000339485 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
VMAC-201ENST00000339485 SEC24BO95487 1268 aa23.72■■□□□ 1.39
VMAC-201ENST00000339485 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
VMAC-201ENST00000339485 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
VMAC-201ENST00000339485 KRT28Q7Z3Y7 464 aa23.7■■□□□ 1.38
VMAC-201ENST00000339485 PLEKHF1Q96S99 279 aa23.7■■□□□ 1.38
VMAC-201ENST00000339485 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
VMAC-201ENST00000339485 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
VMAC-201ENST00000339485 LTN1O94822 1766 aa23.68■■□□□ 1.38
VMAC-201ENST00000339485 HMOX1P09601 288 aa23.67■■□□□ 1.38
VMAC-201ENST00000339485 PANK1Q8TE04 598 aa23.67■■□□□ 1.38
VMAC-201ENST00000339485 COG6Q9Y2V7 657 aa23.67■■□□□ 1.38
VMAC-201ENST00000339485 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
VMAC-201ENST00000339485 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
VMAC-201ENST00000339485 FLT4P35916 1363 aa23.67■■□□□ 1.38
VMAC-201ENST00000339485 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
VMAC-201ENST00000339485 WWC1Q8IX03 1113 aa23.66■■□□□ 1.38
VMAC-201ENST00000339485 BECN1Q14457 450 aa23.66■■□□□ 1.38
VMAC-201ENST00000339485 RSPH6AQ9H0K4 717 aa23.66■■□□□ 1.38
VMAC-201ENST00000339485 FCHSD2O94868 740 aa23.65■■□□□ 1.38
VMAC-201ENST00000339485 AMPHP49418 695 aa23.65■■□□□ 1.38
VMAC-201ENST00000339485 FAM43AQ8N2R8 423 aa23.65■■□□□ 1.38
VMAC-201ENST00000339485 NFAT5O94916 1531 aa23.65■■□□□ 1.38
VMAC-201ENST00000339485 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
VMAC-201ENST00000339485 PRKAR2BP31323 418 aa23.64■■□□□ 1.38
VMAC-201ENST00000339485 PLEKHG5O94827 1062 aa23.63■■□□□ 1.37
VMAC-201ENST00000339485 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
VMAC-201ENST00000339485 PNNQ9H307 717 aaKnown RBP23.63■■□□□ 1.37
VMAC-201ENST00000339485 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
VMAC-201ENST00000339485 NPHP3Q7Z494 1330 aa23.62■■□□□ 1.37
VMAC-201ENST00000339485 ANTXR1Q9H6X2 564 aa23.61■■□□□ 1.37
VMAC-201ENST00000339485 BRINP3Q76B58 766 aa23.61■■□□□ 1.37
VMAC-201ENST00000339485 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
VMAC-201ENST00000339485 SLIT3O75094 1523 aa23.6■■□□□ 1.37
VMAC-201ENST00000339485 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
VMAC-201ENST00000339485 SLKQ9H2G2 1235 aaPredicted RBP23.59■■□□□ 1.37
VMAC-201ENST00000339485 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
VMAC-201ENST00000339485 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
VMAC-201ENST00000339485 HOXC9P31274 260 aa23.59■■□□□ 1.37
VMAC-201ENST00000339485 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
VMAC-201ENST00000339485 PXDNQ92626 1479 aa23.59■■□□□ 1.37
VMAC-201ENST00000339485 AAMPQ13685 434 aa23.58■■□□□ 1.37
VMAC-201ENST00000339485 CCDC27Q2M243 656 aa23.58■■□□□ 1.37
VMAC-201ENST00000339485 RARSP54136 660 aaKnown RBP23.58■■□□□ 1.36
VMAC-201ENST00000339485 AEBP1Q8IUX7 1158 aa23.57■■□□□ 1.36
VMAC-201ENST00000339485 PHACTR3Q96KR7 559 aa23.57■■□□□ 1.36
VMAC-201ENST00000339485 TBC1D32Q96NH3 1257 aa23.57■■□□□ 1.36
VMAC-201ENST00000339485 RTL1A6NKG5 1358 aa23.56■■□□□ 1.36
VMAC-201ENST00000339485 GCP02774 474 aa23.56■■□□□ 1.36
VMAC-201ENST00000339485 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
VMAC-201ENST00000339485 PCDHB15Q9Y5E8 787 aa23.56■■□□□ 1.36
VMAC-201ENST00000339485 ZBTB7CA1YPR0 619 aa23.56■■□□□ 1.36
VMAC-201ENST00000339485 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
VMAC-201ENST00000339485 TNS3Q68CZ2 1445 aa23.55■■□□□ 1.36
VMAC-201ENST00000339485 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
VMAC-201ENST00000339485 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
VMAC-201ENST00000339485 RIPK4P57078 832 aa23.54■■□□□ 1.36
VMAC-201ENST00000339485 RLBP1P12271 317 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms