RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
SRSF3-201ENST00000339436 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
SRSF3-201ENST00000339436 EP400Q96L91 3159 aa17.64■□□□□ 0.41
SRSF3-201ENST00000339436 VPS72Q15906 364 aa17.63■□□□□ 0.41
SRSF3-201ENST00000339436 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
SRSF3-201ENST00000339436 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
SRSF3-201ENST00000339436 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
SRSF3-201ENST00000339436 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
SRSF3-201ENST00000339436 RGS12O14924 1447 aa17.62■□□□□ 0.41
SRSF3-201ENST00000339436 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
SRSF3-201ENST00000339436 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
SRSF3-201ENST00000339436 RBM6P78332 1123 aaKnown RBP17.62■□□□□ 0.41
SRSF3-201ENST00000339436 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 RXRBP28702 533 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
SRSF3-201ENST00000339436 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
SRSF3-201ENST00000339436 FBLN1P23142 703 aa17.6■□□□□ 0.41
SRSF3-201ENST00000339436 STRN4Q9NRL3 753 aa17.6■□□□□ 0.41
SRSF3-201ENST00000339436 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
SRSF3-201ENST00000339436 CRB1P82279 1406 aa17.59■□□□□ 0.41
SRSF3-201ENST00000339436 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
SRSF3-201ENST00000339436 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
SRSF3-201ENST00000339436 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.41
SRSF3-201ENST00000339436 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.4
SRSF3-201ENST00000339436 LARP1Q6PKG0 1096 aaKnown RBP17.57■□□□□ 0.4
SRSF3-201ENST00000339436 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
SRSF3-201ENST00000339436 ERBB3P21860 1342 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
SRSF3-201ENST00000339436 FLT4P35916 1363 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 EVA1CP58658 441 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 IP6K1Q92551 441 aa17.57■□□□□ 0.4
SRSF3-201ENST00000339436 HOXC9P31274 260 aa17.56■□□□□ 0.4
SRSF3-201ENST00000339436 AMPHP49418 695 aa17.55■□□□□ 0.4
SRSF3-201ENST00000339436 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
SRSF3-201ENST00000339436 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
SRSF3-201ENST00000339436 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
SRSF3-201ENST00000339436 TNNT2P45379 298 aaPredicted RBP17.53■□□□□ 0.4
SRSF3-201ENST00000339436 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
SRSF3-201ENST00000339436 INSRP06213 1382 aa17.53■□□□□ 0.4
SRSF3-201ENST00000339436 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.39
SRSF3-201ENST00000339436 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.39
SRSF3-201ENST00000339436 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.39
SRSF3-201ENST00000339436 POLKQ9UBT6 870 aa17.52■□□□□ 0.39
SRSF3-201ENST00000339436 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
SRSF3-201ENST00000339436 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
SRSF3-201ENST00000339436 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
SRSF3-201ENST00000339436 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
SRSF3-201ENST00000339436 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
SRSF3-201ENST00000339436 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
SRSF3-201ENST00000339436 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
SRSF3-201ENST00000339436 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
SRSF3-201ENST00000339436 THRAP3Q9Y2W1 955 aaKnown RBP17.49■□□□□ 0.39
SRSF3-201ENST00000339436 DISP2A7MBM2 1401 aa17.49■□□□□ 0.39
SRSF3-201ENST00000339436 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
SRSF3-201ENST00000339436 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
SRSF3-201ENST00000339436 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
SRSF3-201ENST00000339436 RGPD1P0DJD0 1748 aa17.48■□□□□ 0.39
SRSF3-201ENST00000339436 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
SRSF3-201ENST00000339436 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
SRSF3-201ENST00000339436 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
SRSF3-201ENST00000339436 A0A0G2JS52 829 aa17.46■□□□□ 0.39
SRSF3-201ENST00000339436 MYT1Q01538 1121 aa17.46■□□□□ 0.39
SRSF3-201ENST00000339436 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
SRSF3-201ENST00000339436 NCAPD2Q15021 1401 aa17.45■□□□□ 0.38
SRSF3-201ENST00000339436 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
SRSF3-201ENST00000339436 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
SRSF3-201ENST00000339436 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
SRSF3-201ENST00000339436 PKD1L3Q7Z443 1732 aa17.43■□□□□ 0.38
SRSF3-201ENST00000339436 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
SRSF3-201ENST00000339436 MEGF6O75095 1541 aa17.42■□□□□ 0.38
SRSF3-201ENST00000339436 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
SRSF3-201ENST00000339436 MTHFSP49914 203 aa17.41■□□□□ 0.38
SRSF3-201ENST00000339436 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
SRSF3-201ENST00000339436 NBPF6Q5VWK0 638 aa17.41■□□□□ 0.38
SRSF3-201ENST00000339436 NBPF4Q96M43 638 aa17.41■□□□□ 0.38
SRSF3-201ENST00000339436 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
SRSF3-201ENST00000339436 IL2RBP14784 551 aa17.39■□□□□ 0.37
SRSF3-201ENST00000339436 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
SRSF3-201ENST00000339436 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
SRSF3-201ENST00000339436 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
SRSF3-201ENST00000339436 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
SRSF3-201ENST00000339436 TNS1Q9HBL0 1735 aaKnown RBP17.37■□□□□ 0.37
SRSF3-201ENST00000339436 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
SRSF3-201ENST00000339436 SOCS7O14512 581 aa17.37■□□□□ 0.37
SRSF3-201ENST00000339436 DDB1Q16531 1140 aa17.37■□□□□ 0.37
SRSF3-201ENST00000339436 EYA1Q99502 592 aa17.37■□□□□ 0.37
SRSF3-201ENST00000339436 IL13P35225 146 aa17.35■□□□□ 0.37
SRSF3-201ENST00000339436 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
SRSF3-201ENST00000339436 RALBP1Q15311 655 aa17.34■□□□□ 0.37
SRSF3-201ENST00000339436 KDRP35968 1356 aa17.33■□□□□ 0.37
SRSF3-201ENST00000339436 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.37
SRSF3-201ENST00000339436 RAPGEF4Q8WZA2 1011 aa17.33■□□□□ 0.37
SRSF3-201ENST00000339436 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.36
SRSF3-201ENST00000339436 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
SRSF3-201ENST00000339436 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms