RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ZBTB7BO15156 539 aaPredicted RBP25.15■■□□□ 1.62
RUNX3-202ENST00000338888 NUCB2P80303 420 aa25.15■■□□□ 1.62
RUNX3-202ENST00000338888 RBM27Q9P2N5 1060 aaKnown RBP25.15■■□□□ 1.62
RUNX3-202ENST00000338888 CDC45O75419 566 aa25.14■■□□□ 1.62
RUNX3-202ENST00000338888 IL16Q14005 1332 aa25.14■■□□□ 1.61
RUNX3-202ENST00000338888 PRPF40AO75400 957 aaKnown RBP25.14■■□□□ 1.61
RUNX3-202ENST00000338888 ZKSCAN5Q9Y2L8 839 aa25.13■■□□□ 1.61
RUNX3-202ENST00000338888 ALDH1L2Q3SY69 923 aa25.12■■□□□ 1.61
RUNX3-202ENST00000338888 CYP2E1P05181 493 aaPredicted RBP25.12■■□□□ 1.61
RUNX3-202ENST00000338888 RABEP1Q15276 862 aa25.11■■□□□ 1.61
RUNX3-202ENST00000338888 SIRT2Q8IXJ6 389 aa25.11■■□□□ 1.61
RUNX3-202ENST00000338888 KIF1BO60333 1816 aa25.11■■□□□ 1.61
RUNX3-202ENST00000338888 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
RUNX3-202ENST00000338888 GPT2Q8TD30 523 aa25.1■■□□□ 1.61
RUNX3-202ENST00000338888 NUTM2DQ5VT03 806 aaPredicted RBP25.1■■□□□ 1.61
RUNX3-202ENST00000338888 GSPT1P15170 499 aaKnown RBP25.09■■□□□ 1.61
RUNX3-202ENST00000338888 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
RUNX3-202ENST00000338888 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
RUNX3-202ENST00000338888 USP32Q8NFA0 1604 aa25.08■■□□□ 1.61
RUNX3-202ENST00000338888 MROH2AA6NES4 1674 aa25.08■■□□□ 1.61
RUNX3-202ENST00000338888 CHAMP1Q96JM3 812 aa25.08■■□□□ 1.61
RUNX3-202ENST00000338888 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
RUNX3-202ENST00000338888 NRXN1Q9ULB1 1477 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 ANKRD36BQ8N2N9 1353 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
RUNX3-202ENST00000338888 CABP2Q9NPB3 220 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 QRICH2Q9H0J4 1663 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 NSD2O96028 1365 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 CSPP1Q1MSJ5 1256 aa25.07■■□□□ 1.6
RUNX3-202ENST00000338888 ZGPATQ8N5A5 531 aaKnown RBP25.07■■□□□ 1.6
RUNX3-202ENST00000338888 MLECQ14165 292 aa25.06■■□□□ 1.6
RUNX3-202ENST00000338888 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
RUNX3-202ENST00000338888 SYCE3A1L190 88 aa25.05■■□□□ 1.6
RUNX3-202ENST00000338888 DYNC1I1O14576 645 aa25.05■■□□□ 1.6
RUNX3-202ENST00000338888 TMEM63CQ9P1W3 806 aa25.05■■□□□ 1.6
RUNX3-202ENST00000338888 MED14O60244 1454 aa25.04■■□□□ 1.6
RUNX3-202ENST00000338888 LRSAM1Q6UWE0 723 aa25.03■■□□□ 1.6
RUNX3-202ENST00000338888 USP26Q9BXU7 913 aa25.03■■□□□ 1.6
RUNX3-202ENST00000338888 EVC2Q86UK5 1308 aa25.03■■□□□ 1.6
RUNX3-202ENST00000338888 CHMP4BQ9H444 224 aaKnown RBP25.03■■□□□ 1.6
RUNX3-202ENST00000338888 NSFL1CQ9UNZ2 370 aaKnown RBP25.03■■□□□ 1.6
RUNX3-202ENST00000338888 ZDHHC9Q9Y397 364 aa25.03■■□□□ 1.6
RUNX3-202ENST00000338888 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
RUNX3-202ENST00000338888 PLEKHM2Q8IWE5 1019 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 RNF214Q8ND24 703 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 CCDC39Q9UFE4 941 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 MCM5P33992 734 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 SASS6Q6UVJ0 657 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 CWC22Q9HCG8 908 aaKnown RBP25.02■■□□□ 1.6
RUNX3-202ENST00000338888 SIGLEC1Q9BZZ2 1709 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 SETBP1Q9Y6X0 1596 aa25.02■■□□□ 1.6
RUNX3-202ENST00000338888 MRPL50Q8N5N7 158 aaKnown RBP25.01■■□□□ 1.59
RUNX3-202ENST00000338888 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
RUNX3-202ENST00000338888 ELL2O00472 640 aaPredicted RBP25.01■■□□□ 1.59
RUNX3-202ENST00000338888 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
RUNX3-202ENST00000338888 MTERF4Q7Z6M4 381 aaKnown RBP25.01■■□□□ 1.59
RUNX3-202ENST00000338888 IDI1Q13907 227 aa25■■□□□ 1.59
RUNX3-202ENST00000338888 FOXD4L5Q5VV16 416 aaPredicted RBP25■■□□□ 1.59
RUNX3-202ENST00000338888 FOXD4L4Q8WXT5 416 aaPredicted RBP25■■□□□ 1.59
RUNX3-202ENST00000338888 ADGRB3O60242 1522 aa25■■□□□ 1.59
RUNX3-202ENST00000338888 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
RUNX3-202ENST00000338888 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
RUNX3-202ENST00000338888 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
RUNX3-202ENST00000338888 PRDM10Q9NQV6 1147 aa25■■□□□ 1.59
RUNX3-202ENST00000338888 VAMP4O75379 141 aa24.99■■□□□ 1.59
RUNX3-202ENST00000338888 BRPF1P55201 1214 aaPredicted RBP24.99■■□□□ 1.59
RUNX3-202ENST00000338888 SMAP1Q8IYB5 467 aaPredicted RBP24.99■■□□□ 1.59
RUNX3-202ENST00000338888 TSPYL6Q8N831 410 aa24.99■■□□□ 1.59
RUNX3-202ENST00000338888 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
RUNX3-202ENST00000338888 COL3A1P02461 1466 aaPredicted RBP24.97■■□□□ 1.59
RUNX3-202ENST00000338888 TTC22Q5TAA0 569 aa24.97■■□□□ 1.59
RUNX3-202ENST00000338888 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
RUNX3-202ENST00000338888 ST18O60284 1047 aa24.97■■□□□ 1.59
RUNX3-202ENST00000338888 ARHGAP45Q92619 1136 aa24.97■■□□□ 1.59
RUNX3-202ENST00000338888 KIF13AQ9H1H9 1805 aa24.96■■□□□ 1.59
RUNX3-202ENST00000338888 ADGRB1O14514 1584 aa24.96■■□□□ 1.59
RUNX3-202ENST00000338888 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
RUNX3-202ENST00000338888 PTMAP06454 111 aaKnown RBP24.95■■□□□ 1.58
RUNX3-202ENST00000338888 INTS3Q68E01 1043 aaKnown RBP24.95■■□□□ 1.58
RUNX3-202ENST00000338888 A0A1W2PP64 1363 aa24.95■■□□□ 1.58
RUNX3-202ENST00000338888 ATAD2Q6PL18 1390 aa24.95■■□□□ 1.58
RUNX3-202ENST00000338888 PODXL2Q9NZ53 605 aa24.94■■□□□ 1.58
RUNX3-202ENST00000338888 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
RUNX3-202ENST00000338888 PUS7Q96PZ0 661 aaKnown RBP24.94■■□□□ 1.58
RUNX3-202ENST00000338888 OTUD7AQ8TE49 926 aaPredicted RBP24.93■■□□□ 1.58
RUNX3-202ENST00000338888 TULP4Q9NRJ4 1543 aa24.93■■□□□ 1.58
RUNX3-202ENST00000338888 FYB1O15117 783 aa24.93■■□□□ 1.58
RUNX3-202ENST00000338888 PRKAR2BP31323 418 aa24.92■■□□□ 1.58
RUNX3-202ENST00000338888 JARID2Q92833 1246 aaPredicted RBP24.92■■□□□ 1.58
RUNX3-202ENST00000338888 CFAP44Q96MT7 982 aa24.92■■□□□ 1.58
RUNX3-202ENST00000338888 ABCC4O15439 1325 aa24.92■■□□□ 1.58
RUNX3-202ENST00000338888 PTCH1Q13635 1447 aa24.92■■□□□ 1.58
RUNX3-202ENST00000338888 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
RUNX3-202ENST00000338888 DNTTIP2Q5QJE6 756 aaKnown RBP24.91■■□□□ 1.58
RUNX3-202ENST00000338888 DCTPP1Q9H773 170 aa24.91■■□□□ 1.58
RUNX3-202ENST00000338888 KIAA2012Q0VF49 1180 aa24.9■■□□□ 1.58
RUNX3-202ENST00000338888 MPNDQ8N594 471 aa24.9■■□□□ 1.58
RUNX3-202ENST00000338888 ZHX1Q9UKY1 873 aaPredicted RBP24.9■■□□□ 1.58
RUNX3-202ENST00000338888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.9■■□□□ 1.58
RUNX3-202ENST00000338888 SDSP20132 328 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms