RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 NUCB2P80303 420 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 CNNM1Q9NRU3 951 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 ABCC10Q5T3U5 1492 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 C8orf37Q96NL8 207 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 CHMP5Q9NZZ3 219 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 TTC39AQ5SRH9 613 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
TRIM2-201ENST00000338700 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
TRIM2-201ENST00000338700 GNAI2P04899 355 aa9.3□□□□□ -0.92
TRIM2-201ENST00000338700 FOXO3O43524 673 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 EXOSC9Q06265 439 aaKnown RBP9.29□□□□□ -0.92
TRIM2-201ENST00000338700 IKQ13123 557 aaPredicted RBP9.29□□□□□ -0.92
TRIM2-201ENST00000338700 CCDC158Q5M9N0 1113 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 UBE2Q2Q8WVN8 375 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 DNAJC2Q99543 621 aaKnown RBP9.29□□□□□ -0.92
TRIM2-201ENST00000338700 CCDC73Q6ZRK6 1079 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 FOSBP53539 338 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 C22orf23Q9BZE7 217 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 KDM5BQ9UGL1 1544 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 SASS6Q6UVJ0 657 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.29□□□□□ -0.92
TRIM2-201ENST00000338700 ATP10AO60312 1499 aa9.29□□□□□ -0.92
TRIM2-201ENST00000338700 CCT4P50991 539 aaKnown RBP9.28□□□□□ -0.92
TRIM2-201ENST00000338700 CNKSR2Q8WXI2 1034 aa9.28□□□□□ -0.92
TRIM2-201ENST00000338700 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM2-201ENST00000338700 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
TRIM2-201ENST00000338700 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
TRIM2-201ENST00000338700 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
TRIM2-201ENST00000338700 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 CCAR2Q8N163 923 aaKnown RBP9.27□□□□□ -0.93
TRIM2-201ENST00000338700 GCC1Q96CN9 775 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 CFAP74Q9C0B2 1584 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
TRIM2-201ENST00000338700 CT47B1P0C2W7 299 aaPredicted RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 EXOC5O00471 708 aa9.26□□□□□ -0.93
TRIM2-201ENST00000338700 NOB1Q9ULX3 412 aaKnown RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 R3HCC1Q9Y3T6 440 aaKnown RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 THOC2Q8NI27 1593 aaKnown RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 WDR63Q8IWG1 891 aa9.26□□□□□ -0.93
TRIM2-201ENST00000338700 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRIM2-201ENST00000338700 CHD1O14646 1710 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 NBPF8Q3BBV2 869 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 SRCIN1Q9C0H9 1055 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 CCAR1Q8IX12 1150 aaKnown RBP9.25□□□□□ -0.93
TRIM2-201ENST00000338700 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
TRIM2-201ENST00000338700 GPS2Q13227 327 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 PDE3AQ14432 1141 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 MYL6BP14649 208 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 EPS15P42566 896 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 CCDC57Q2TAC2 916 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 ZSCAN25Q6NSZ9 544 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 MPHOSPH8Q99549 860 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 NAT10Q9H0A0 1025 aaKnown RBP9.24□□□□□ -0.93
TRIM2-201ENST00000338700 NACAP1Q9BZK3 213 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 GSE1Q14687 1217 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
TRIM2-201ENST00000338700 DUOX2Q9NRD8 1548 aa9.24□□□□□ -0.93
TRIM2-201ENST00000338700 MCM2P49736 904 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 RRP12Q5JTH9 1297 aaKnown RBP9.23□□□□□ -0.93
TRIM2-201ENST00000338700 ABCC5O15440 1437 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 LRRCC1Q9C099 1032 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 SYCP2Q9BX26 1530 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
TRIM2-201ENST00000338700 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
TRIM2-201ENST00000338700 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 ZFYVE16Q7Z3T8 1539 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 FCHSD2O94868 740 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 CDK5RAP3Q96JB5 506 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 C1orf115Q9H7X2 142 aa9.23□□□□□ -0.93
TRIM2-201ENST00000338700 GPATCH8Q9UKJ3 1502 aaKnown RBP9.23□□□□□ -0.93
TRIM2-201ENST00000338700 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 CT47A1Q5JQC4 288 aaPredicted RBP9.22□□□□□ -0.93
TRIM2-201ENST00000338700 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 TMOD3Q9NYL9 352 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 NUP153P49790 1475 aaKnown RBP9.22□□□□□ -0.93
TRIM2-201ENST00000338700 NEO1Q92859 1461 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 HOMER1Q86YM7 354 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 ZPR1O75312 459 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 PDCP20941 246 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 TXLNAP40222 546 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 WASLO00401 505 aaPredicted RBP9.22□□□□□ -0.93
TRIM2-201ENST00000338700 ODF2Q5BJF6 829 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms