RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ZNF853P0CG23 659 aa12.77□□□□□ -0.37
HIF1A-202ENST00000337138 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
HIF1A-202ENST00000337138 TRIM27P14373 513 aa12.76□□□□□ -0.37
HIF1A-202ENST00000337138 EXOSC9Q06265 439 aaKnown RBP12.76□□□□□ -0.37
HIF1A-202ENST00000337138 APBB1O00213 710 aa12.76□□□□□ -0.37
HIF1A-202ENST00000337138 FBLN1P23142 703 aa12.76□□□□□ -0.37
HIF1A-202ENST00000337138 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
HIF1A-202ENST00000337138 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
HIF1A-202ENST00000337138 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
HIF1A-202ENST00000337138 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
HIF1A-202ENST00000337138 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
HIF1A-202ENST00000337138 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
HIF1A-202ENST00000337138 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
HIF1A-202ENST00000337138 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
HIF1A-202ENST00000337138 MYH16Q9H6N6 1097 aa12.74□□□□□ -0.37
HIF1A-202ENST00000337138 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
HIF1A-202ENST00000337138 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
HIF1A-202ENST00000337138 RAPGEF3O95398 923 aa12.73□□□□□ -0.37
HIF1A-202ENST00000337138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
HIF1A-202ENST00000337138 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
HIF1A-202ENST00000337138 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
HIF1A-202ENST00000337138 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
HIF1A-202ENST00000337138 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
HIF1A-202ENST00000337138 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
HIF1A-202ENST00000337138 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
HIF1A-202ENST00000337138 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
HIF1A-202ENST00000337138 HSCBQ8IWL3 235 aa12.72□□□□□ -0.37
HIF1A-202ENST00000337138 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
HIF1A-202ENST00000337138 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
HIF1A-202ENST00000337138 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
HIF1A-202ENST00000337138 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 PANK2Q9BZ23 570 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 CACNA1FO60840 1977 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
HIF1A-202ENST00000337138 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
HIF1A-202ENST00000337138 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
HIF1A-202ENST00000337138 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
HIF1A-202ENST00000337138 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
HIF1A-202ENST00000337138 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
HIF1A-202ENST00000337138 RIPK4P57078 832 aa12.7□□□□□ -0.38
HIF1A-202ENST00000337138 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
HIF1A-202ENST00000337138 SOX12O15370 315 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 HMOX1P09601 288 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 ABCC4O15439 1325 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 POLKQ9UBT6 870 aa12.69□□□□□ -0.38
HIF1A-202ENST00000337138 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
HIF1A-202ENST00000337138 NUCB1Q02818 461 aa12.68□□□□□ -0.38
HIF1A-202ENST00000337138 EDC4Q6P2E9 1401 aaKnown RBP12.68□□□□□ -0.38
HIF1A-202ENST00000337138 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
HIF1A-202ENST00000337138 IL13P35225 146 aa12.67□□□□□ -0.38
HIF1A-202ENST00000337138 DIP2AQ14689 1571 aa12.67□□□□□ -0.38
HIF1A-202ENST00000337138 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
HIF1A-202ENST00000337138 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
HIF1A-202ENST00000337138 ALDH1L2Q3SY69 923 aa12.67□□□□□ -0.38
HIF1A-202ENST00000337138 METP08581 1390 aa12.66□□□□□ -0.38
HIF1A-202ENST00000337138 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
HIF1A-202ENST00000337138 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
HIF1A-202ENST00000337138 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
HIF1A-202ENST00000337138 TRAK2O60296 914 aa12.66□□□□□ -0.38
HIF1A-202ENST00000337138 MCM4P33991 863 aa12.65□□□□□ -0.38
HIF1A-202ENST00000337138 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
HIF1A-202ENST00000337138 VAMP4O75379 141 aa12.65□□□□□ -0.38
HIF1A-202ENST00000337138 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
HIF1A-202ENST00000337138 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.39
HIF1A-202ENST00000337138 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
HIF1A-202ENST00000337138 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-202ENST00000337138 CLEC17AQ6ZS10 378 aa12.64□□□□□ -0.39
HIF1A-202ENST00000337138 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-202ENST00000337138 KIF24Q5T7B8 1368 aa12.64□□□□□ -0.39
HIF1A-202ENST00000337138 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
HIF1A-202ENST00000337138 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
HIF1A-202ENST00000337138 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
HIF1A-202ENST00000337138 CRB1P82279 1406 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 CHMP5Q9NZZ3 219 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 A0A0G2JS52 829 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
HIF1A-202ENST00000337138 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
HIF1A-202ENST00000337138 SNX21Q969T3 373 aa12.63□□□□□ -0.39
HIF1A-202ENST00000337138 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
HIF1A-202ENST00000337138 FCHSD2O94868 740 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 RIMS2Q9UQ26 1411 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
HIF1A-202ENST00000337138 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
HIF1A-202ENST00000337138 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
HIF1A-202ENST00000337138 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
HIF1A-202ENST00000337138 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
HIF1A-202ENST00000337138 IPO8O15397 1037 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms