RNA–Protein interactions for RNA: ENST00000336643.9

SLC39A9-202, Transcript of solute carrier family 39 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A9, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-202ENST00000336643 PXDNQ92626 1479 aa12.06□□□□□ -0.48
SLC39A9-202ENST00000336643 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
SLC39A9-202ENST00000336643 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
SLC39A9-202ENST00000336643 IL13P35225 146 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
SLC39A9-202ENST00000336643 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 KDRP35968 1356 aa12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 NME9Q86XW9 330 aa12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
SLC39A9-202ENST00000336643 SHANK3Q9BYB0 1731 aa12.02□□□□□ -0.49
SLC39A9-202ENST00000336643 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
SLC39A9-202ENST00000336643 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.49
SLC39A9-202ENST00000336643 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
SLC39A9-202ENST00000336643 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
SLC39A9-202ENST00000336643 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
SLC39A9-202ENST00000336643 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
SLC39A9-202ENST00000336643 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
SLC39A9-202ENST00000336643 BCAR3O75815 825 aa12□□□□□ -0.49
SLC39A9-202ENST00000336643 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
SLC39A9-202ENST00000336643 FAM161AQ3B820 660 aa12□□□□□ -0.49
SLC39A9-202ENST00000336643 WWC1Q8IX03 1113 aa12□□□□□ -0.49
SLC39A9-202ENST00000336643 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
SLC39A9-202ENST00000336643 RUNDC1Q96C34 613 aa11.99□□□□□ -0.49
SLC39A9-202ENST00000336643 USP19O94966 1318 aa11.98□□□□□ -0.49
SLC39A9-202ENST00000336643 FBLN1P23142 703 aa11.98□□□□□ -0.49
SLC39A9-202ENST00000336643 USP35Q9P2H5 1018 aa11.98□□□□□ -0.49
SLC39A9-202ENST00000336643 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
SLC39A9-202ENST00000336643 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
SLC39A9-202ENST00000336643 E9PSI1 815 aa11.97□□□□□ -0.49
SLC39A9-202ENST00000336643 GLI3P10071 1580 aa11.97□□□□□ -0.49
SLC39A9-202ENST00000336643 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
SLC39A9-202ENST00000336643 WNK3Q9BYP7 1800 aa11.97□□□□□ -0.49
SLC39A9-202ENST00000336643 SBNO1A3KN83 1393 aa11.96□□□□□ -0.5
SLC39A9-202ENST00000336643 ARHGEF10O15013 1369 aa11.96□□□□□ -0.5
SLC39A9-202ENST00000336643 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
SLC39A9-202ENST00000336643 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
SLC39A9-202ENST00000336643 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
SLC39A9-202ENST00000336643 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
SLC39A9-202ENST00000336643 PANK1Q8TE04 598 aa11.94□□□□□ -0.5
SLC39A9-202ENST00000336643 IL16Q14005 1332 aa11.94□□□□□ -0.5
SLC39A9-202ENST00000336643 NFKBIBQ15653 356 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 FCHSD2O94868 740 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 PAPPAQ13219 1627 aa11.93□□□□□ -0.5
SLC39A9-202ENST00000336643 CRB1P82279 1406 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 IL27Q8NEV9 243 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
SLC39A9-202ENST00000336643 AHDC1Q5TGY3 1603 aaPredicted RBP11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 FLT4P35916 1363 aa11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
SLC39A9-202ENST00000336643 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
SLC39A9-202ENST00000336643 PHACTR3Q96KR7 559 aa11.9□□□□□ -0.5
SLC39A9-202ENST00000336643 DIAPH1O60610 1272 aaKnown RBP11.9□□□□□ -0.5
SLC39A9-202ENST00000336643 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
SLC39A9-202ENST00000336643 IGHDP01880 384 aa11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 MSH6P52701 1360 aa11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 GSE1Q14687 1217 aa11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 COG3Q96JB2 828 aa11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
SLC39A9-202ENST00000336643 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
SLC39A9-202ENST00000336643 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
SLC39A9-202ENST00000336643 RRS1Q15050 365 aaKnown RBP11.88□□□□□ -0.51
SLC39A9-202ENST00000336643 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
SLC39A9-202ENST00000336643 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 PDE3AQ14432 1141 aa11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 SLKQ9H2G2 1235 aaPredicted RBP11.87□□□□□ -0.51
SLC39A9-202ENST00000336643 MRC1P22897 1456 aa11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 BECN1Q14457 450 aa11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 FRAT2O75474 233 aaPredicted RBP11.86□□□□□ -0.51
SLC39A9-202ENST00000336643 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
SLC39A9-202ENST00000336643 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
SLC39A9-202ENST00000336643 RGS12O14924 1447 aa11.85□□□□□ -0.51
SLC39A9-202ENST00000336643 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
SLC39A9-202ENST00000336643 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
SLC39A9-202ENST00000336643 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms