RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 AXIN2Q9Y2T1 843 aa18.44■□□□□ 0.54
TUBA1B-202ENST00000336023 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
TUBA1B-202ENST00000336023 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
TUBA1B-202ENST00000336023 INSRP06213 1382 aa18.43■□□□□ 0.54
TUBA1B-202ENST00000336023 CDK12Q9NYV4 1490 aaPredicted RBP18.43■□□□□ 0.54
TUBA1B-202ENST00000336023 LRP6O75581 1613 aa18.41■□□□□ 0.54
TUBA1B-202ENST00000336023 PEAK1Q9H792 1746 aa18.41■□□□□ 0.54
TUBA1B-202ENST00000336023 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
TUBA1B-202ENST00000336023 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
TUBA1B-202ENST00000336023 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.53
TUBA1B-202ENST00000336023 MEX3CQ5U5Q3 659 aaKnown RBP18.39■□□□□ 0.53
TUBA1B-202ENST00000336023 LTV1Q96GA3 475 aaPredicted RBP18.39■□□□□ 0.53
TUBA1B-202ENST00000336023 LTN1O94822 1766 aa18.39■□□□□ 0.53
TUBA1B-202ENST00000336023 C8orf37Q96NL8 207 aa18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 IL13P35225 146 aa18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
TUBA1B-202ENST00000336023 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
TUBA1B-202ENST00000336023 ABCC6O95255 1503 aa18.37■□□□□ 0.53
TUBA1B-202ENST00000336023 CAMTA1Q9Y6Y1 1673 aa18.37■□□□□ 0.53
TUBA1B-202ENST00000336023 ERBB3P21860 1342 aa18.36■□□□□ 0.53
TUBA1B-202ENST00000336023 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
TUBA1B-202ENST00000336023 COL18A1P39060 1754 aa18.36■□□□□ 0.53
TUBA1B-202ENST00000336023 EVA1CP58658 441 aa18.35■□□□□ 0.53
TUBA1B-202ENST00000336023 PNISRQ8TF01 805 aaKnown RBP18.35■□□□□ 0.53
TUBA1B-202ENST00000336023 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
TUBA1B-202ENST00000336023 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.53
TUBA1B-202ENST00000336023 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
TUBA1B-202ENST00000336023 SLIT2O94813 1529 aa18.33■□□□□ 0.52
TUBA1B-202ENST00000336023 EYA1Q99502 592 aa18.32■□□□□ 0.52
TUBA1B-202ENST00000336023 WDR17Q8IZU2 1322 aa18.32■□□□□ 0.52
TUBA1B-202ENST00000336023 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 NBPF6Q5VWK0 638 aa18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 NBPF4Q96M43 638 aa18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
TUBA1B-202ENST00000336023 TOM1L2Q6ZVM7 507 aa18.3■□□□□ 0.52
TUBA1B-202ENST00000336023 FAM9BQ8IZU0 186 aa18.3■□□□□ 0.52
TUBA1B-202ENST00000336023 USP21Q9UK80 565 aa18.3■□□□□ 0.52
TUBA1B-202ENST00000336023 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
TUBA1B-202ENST00000336023 AFF2P51816 1311 aa18.29■□□□□ 0.52
TUBA1B-202ENST00000336023 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
TUBA1B-202ENST00000336023 BCL9LQ86UU0 1499 aa18.29■□□□□ 0.52
TUBA1B-202ENST00000336023 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
TUBA1B-202ENST00000336023 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
TUBA1B-202ENST00000336023 USHBP1Q8N6Y0 703 aa18.28■□□□□ 0.52
TUBA1B-202ENST00000336023 HMOX1P09601 288 aa18.27■□□□□ 0.52
TUBA1B-202ENST00000336023 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
TUBA1B-202ENST00000336023 CARD10Q9BWT7 1032 aa18.27■□□□□ 0.52
TUBA1B-202ENST00000336023 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
TUBA1B-202ENST00000336023 CRB1P82279 1406 aa18.25■□□□□ 0.51
TUBA1B-202ENST00000336023 FCHSD2O94868 740 aa18.25■□□□□ 0.51
TUBA1B-202ENST00000336023 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
TUBA1B-202ENST00000336023 VPS72Q15906 364 aa18.24■□□□□ 0.51
TUBA1B-202ENST00000336023 RSPH6AQ9H0K4 717 aa18.24■□□□□ 0.51
TUBA1B-202ENST00000336023 CCDC9Q9Y3X0 531 aaKnown RBP18.24■□□□□ 0.51
TUBA1B-202ENST00000336023 KDRP35968 1356 aa18.24■□□□□ 0.51
TUBA1B-202ENST00000336023 NWD2Q9ULI1 1742 aa18.24■□□□□ 0.51
TUBA1B-202ENST00000336023 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
TUBA1B-202ENST00000336023 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
TUBA1B-202ENST00000336023 NCAPD2Q15021 1401 aa18.22■□□□□ 0.51
TUBA1B-202ENST00000336023 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
TUBA1B-202ENST00000336023 NRAPQ86VF7 1730 aa18.22■□□□□ 0.51
TUBA1B-202ENST00000336023 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
TUBA1B-202ENST00000336023 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
TUBA1B-202ENST00000336023 CCDC146Q8IYE0 955 aa18.21■□□□□ 0.51
TUBA1B-202ENST00000336023 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
TUBA1B-202ENST00000336023 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
TUBA1B-202ENST00000336023 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
TUBA1B-202ENST00000336023 ZNF772Q68DY9 489 aaPredicted RBP18.2■□□□□ 0.5
TUBA1B-202ENST00000336023 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
TUBA1B-202ENST00000336023 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
TUBA1B-202ENST00000336023 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
TUBA1B-202ENST00000336023 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
TUBA1B-202ENST00000336023 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
TUBA1B-202ENST00000336023 THRAP3Q9Y2W1 955 aaKnown RBP18.19■□□□□ 0.5
TUBA1B-202ENST00000336023 RGPD2P0DJD1 1756 aa18.19■□□□□ 0.5
TUBA1B-202ENST00000336023 ATRNO75882 1429 aa18.18■□□□□ 0.5
TUBA1B-202ENST00000336023 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
TUBA1B-202ENST00000336023 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
TUBA1B-202ENST00000336023 IL2RBP14784 551 aa18.17■□□□□ 0.5
TUBA1B-202ENST00000336023 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
TUBA1B-202ENST00000336023 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
TUBA1B-202ENST00000336023 NEFMP07197 916 aa18.16■□□□□ 0.5
TUBA1B-202ENST00000336023 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
TUBA1B-202ENST00000336023 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.16■□□□□ 0.5
TUBA1B-202ENST00000336023 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
TUBA1B-202ENST00000336023 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
TUBA1B-202ENST00000336023 MEGF6O75095 1541 aa18.15■□□□□ 0.5
TUBA1B-202ENST00000336023 FAM98CQ17RN3 349 aaKnown RBP18.15■□□□□ 0.5
TUBA1B-202ENST00000336023 APAF1O14727 1248 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms