RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
UBE2E2-201ENST00000335798 AFF2P51816 1311 aa26.44■■□□□ 1.82
UBE2E2-201ENST00000335798 FAM208AQ9UK61 1670 aaKnown RBP26.43■■□□□ 1.82
UBE2E2-201ENST00000335798 POLKQ9UBT6 870 aa26.43■■□□□ 1.82
UBE2E2-201ENST00000335798 AXIN2Q9Y2T1 843 aa26.43■■□□□ 1.82
UBE2E2-201ENST00000335798 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
UBE2E2-201ENST00000335798 CNGB1Q14028 1251 aaPredicted RBP26.42■■□□□ 1.82
UBE2E2-201ENST00000335798 EMILIN1Q9Y6C2 1016 aa26.42■■□□□ 1.82
UBE2E2-201ENST00000335798 RGPD2P0DJD1 1756 aa26.42■■□□□ 1.82
UBE2E2-201ENST00000335798 BTG4Q9NY30 223 aa26.41■■□□□ 1.82
UBE2E2-201ENST00000335798 FLT4P35916 1363 aa26.41■■□□□ 1.82
UBE2E2-201ENST00000335798 CDK12Q9NYV4 1490 aaPredicted RBP26.41■■□□□ 1.82
UBE2E2-201ENST00000335798 ZBTB7CA1YPR0 619 aa26.4■■□□□ 1.82
UBE2E2-201ENST00000335798 IP6K1Q92551 441 aa26.4■■□□□ 1.82
UBE2E2-201ENST00000335798 HOXC9P31274 260 aa26.39■■□□□ 1.82
UBE2E2-201ENST00000335798 RGS17Q9UGC6 210 aaPredicted RBP26.39■■□□□ 1.82
UBE2E2-201ENST00000335798 USP21Q9UK80 565 aa26.38■■□□□ 1.81
UBE2E2-201ENST00000335798 ATRNO75882 1429 aa26.37■■□□□ 1.81
UBE2E2-201ENST00000335798 INSRP06213 1382 aa26.37■■□□□ 1.81
UBE2E2-201ENST00000335798 AMPHP49418 695 aa26.37■■□□□ 1.81
UBE2E2-201ENST00000335798 UNC5CLQ8IV45 518 aa26.37■■□□□ 1.81
UBE2E2-201ENST00000335798 WNK3Q9BYP7 1800 aa26.35■■□□□ 1.81
UBE2E2-201ENST00000335798 PPP2R1AP30153 589 aa26.35■■□□□ 1.81
UBE2E2-201ENST00000335798 RALBP1Q15311 655 aa26.35■■□□□ 1.81
UBE2E2-201ENST00000335798 PRKRIP1Q9H875 184 aaPredicted RBP26.35■■□□□ 1.81
UBE2E2-201ENST00000335798 ERBB3P21860 1342 aa26.34■■□□□ 1.81
UBE2E2-201ENST00000335798 GLI3P10071 1580 aa26.34■■□□□ 1.81
UBE2E2-201ENST00000335798 HSP90AB2PQ58FF8 381 aa26.34■■□□□ 1.81
UBE2E2-201ENST00000335798 COL3A1P02461 1466 aaPredicted RBP26.33■■□□□ 1.81
UBE2E2-201ENST00000335798 RGPD1P0DJD0 1748 aa26.32■■□□□ 1.8
UBE2E2-201ENST00000335798 MTHFSP49914 203 aa26.32■■□□□ 1.8
UBE2E2-201ENST00000335798 ZNF772Q68DY9 489 aaPredicted RBP26.32■■□□□ 1.8
UBE2E2-201ENST00000335798 WDR17Q8IZU2 1322 aa26.31■■□□□ 1.8
UBE2E2-201ENST00000335798 PPM1GO15355 546 aaPredicted RBP26.3■■□□□ 1.8
UBE2E2-201ENST00000335798 VPS72Q15906 364 aa26.3■■□□□ 1.8
UBE2E2-201ENST00000335798 PHF23Q9BUL5 403 aaPredicted RBP26.3■■□□□ 1.8
UBE2E2-201ENST00000335798 STRN4Q9NRL3 753 aa26.3■■□□□ 1.8
UBE2E2-201ENST00000335798 CRB1P82279 1406 aa26.29■■□□□ 1.8
UBE2E2-201ENST00000335798 LARP1Q6PKG0 1096 aaKnown RBP26.29■■□□□ 1.8
UBE2E2-201ENST00000335798 ANKRD24Q8TF21 1146 aa26.29■■□□□ 1.8
UBE2E2-201ENST00000335798 TRPC5Q9UL62 973 aaPredicted RBP26.28■■□□□ 1.8
UBE2E2-201ENST00000335798 MYBBP1AQ9BQG0 1328 aaKnown RBP26.27■■□□□ 1.8
UBE2E2-201ENST00000335798 EVA1CP58658 441 aa26.26■■□□□ 1.79
UBE2E2-201ENST00000335798 SPATA31A5Q5VU36 1347 aa26.26■■□□□ 1.79
UBE2E2-201ENST00000335798 SPATA31A7Q8IWB4 1347 aa26.26■■□□□ 1.79
UBE2E2-201ENST00000335798 NCAPD2Q15021 1401 aa26.25■■□□□ 1.79
UBE2E2-201ENST00000335798 POTEAQ6S8J7 498 aa26.25■■□□□ 1.79
UBE2E2-201ENST00000335798 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
UBE2E2-201ENST00000335798 SPATA31A1Q5TZJ5 1347 aa26.24■■□□□ 1.79
UBE2E2-201ENST00000335798 THSD7AQ9UPZ6 1657 aa26.24■■□□□ 1.79
UBE2E2-201ENST00000335798 EIF4A2Q14240 407 aaKnown RBP26.23■■□□□ 1.79
UBE2E2-201ENST00000335798 LTV1Q96GA3 475 aaPredicted RBP26.23■■□□□ 1.79
UBE2E2-201ENST00000335798 GJD4Q96KN9 370 aaPredicted RBP26.22■■□□□ 1.79
UBE2E2-201ENST00000335798 CARD10Q9BWT7 1032 aa26.21■■□□□ 1.79
UBE2E2-201ENST00000335798 PARP4Q9UKK3 1724 aaKnown RBP26.21■■□□□ 1.79
UBE2E2-201ENST00000335798 ANP32CO43423 234 aa26.2■■□□□ 1.79
UBE2E2-201ENST00000335798 CSB-PGBD3P0DP91 1061 aa26.2■■□□□ 1.79
UBE2E2-201ENST00000335798 TOM1L2Q6ZVM7 507 aa26.2■■□□□ 1.79
UBE2E2-201ENST00000335798 IL13P35225 146 aa26.19■■□□□ 1.78
UBE2E2-201ENST00000335798 NBPF6Q5VWK0 638 aa26.18■■□□□ 1.78
UBE2E2-201ENST00000335798 NBPF4Q96M43 638 aa26.18■■□□□ 1.78
UBE2E2-201ENST00000335798 DISP2A7MBM2 1401 aa26.17■■□□□ 1.78
UBE2E2-201ENST00000335798 BRWD3Q6RI45 1802 aa26.17■■□□□ 1.78
UBE2E2-201ENST00000335798 IGSF1Q8N6C5 1336 aa26.17■■□□□ 1.78
UBE2E2-201ENST00000335798 RBM6P78332 1123 aaKnown RBP26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 DIEXFQ68CQ4 756 aaKnown RBP26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 NLRP2Q9NX02 1062 aa26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 THRAP3Q9Y2W1 955 aaKnown RBP26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 CCDC9Q9Y3X0 531 aaKnown RBP26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 LRRC37A3O60309 1634 aa26.16■■□□□ 1.78
UBE2E2-201ENST00000335798 DIAPH1O60610 1272 aaKnown RBP26.15■■□□□ 1.78
UBE2E2-201ENST00000335798 TCP11L2Q8N4U5 519 aa26.15■■□□□ 1.78
UBE2E2-201ENST00000335798 CFAP53Q96M91 514 aa26.15■■□□□ 1.78
UBE2E2-201ENST00000335798 EYA1Q99502 592 aa26.15■■□□□ 1.78
UBE2E2-201ENST00000335798 SHANK3Q9BYB0 1731 aa26.15■■□□□ 1.78
UBE2E2-201ENST00000335798 BARGINQ6ZT62 677 aa26.14■■□□□ 1.78
UBE2E2-201ENST00000335798 USP35Q9P2H5 1018 aa26.14■■□□□ 1.78
UBE2E2-201ENST00000335798 ONECUT3O60422 494 aaPredicted RBP26.14■■□□□ 1.77
UBE2E2-201ENST00000335798 RXRBP28702 533 aa26.13■■□□□ 1.77
UBE2E2-201ENST00000335798 PKD1L3Q7Z443 1732 aa26.12■■□□□ 1.77
UBE2E2-201ENST00000335798 KDRP35968 1356 aa26.12■■□□□ 1.77
UBE2E2-201ENST00000335798 MEGF6O75095 1541 aa26.11■■□□□ 1.77
UBE2E2-201ENST00000335798 RGS12O14924 1447 aa26.11■■□□□ 1.77
UBE2E2-201ENST00000335798 USHBP1Q8N6Y0 703 aa26.11■■□□□ 1.77
UBE2E2-201ENST00000335798 FAM98CQ17RN3 349 aaKnown RBP26.1■■□□□ 1.77
UBE2E2-201ENST00000335798 CCDC184Q52MB2 194 aa26.08■■□□□ 1.77
UBE2E2-201ENST00000335798 OVOS2A0A0G2JMS6 1433 aa26.06■■□□□ 1.76
UBE2E2-201ENST00000335798 IL2RBP14784 551 aa26.05■■□□□ 1.76
UBE2E2-201ENST00000335798 AEBP1Q8IUX7 1158 aa26.05■■□□□ 1.76
UBE2E2-201ENST00000335798 CDCA7Q9BWT1 371 aaPredicted RBP26.04■■□□□ 1.76
UBE2E2-201ENST00000335798 PLEKHG2Q9H7P9 1386 aa26.04■■□□□ 1.76
UBE2E2-201ENST00000335798 TNS2Q63HR2 1409 aa26.04■■□□□ 1.76
UBE2E2-201ENST00000335798 SULT6B1Q6IMI4 303 aa26.03■■□□□ 1.76
UBE2E2-201ENST00000335798 SEPT12Q8IYM1 358 aa26.02■■□□□ 1.76
UBE2E2-201ENST00000335798 NUDCQ9Y266 331 aa26.02■■□□□ 1.76
UBE2E2-201ENST00000335798 U2SURPO15042 1029 aaKnown RBP26.01■■□□□ 1.75
UBE2E2-201ENST00000335798 HMOX1P09601 288 aa25.99■■□□□ 1.75
UBE2E2-201ENST00000335798 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
UBE2E2-201ENST00000335798 U2AF1L5P0DN76 240 aaPredicted RBP25.97■■□□□ 1.75
UBE2E2-201ENST00000335798 U2AF1Q01081 240 aaKnown RBP eCLIP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms