RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 GOLGA3Q08378 1498 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 CHGAP10645 457 aaKnown RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 CLIP1P30622 1438 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 BLVRAP53004 296 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 CCDC181Q5TID7 509 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 CEP57Q86XR8 500 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 PDCD7Q8N8D1 485 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 MMS22LQ6ZRQ5 1243 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 ZNF365Q70YC5 407 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 BUB1BO60566 1050 aaPredicted RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 AEBP2Q6ZN18 517 aaPredicted RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 LUC7LQ9NQ29 371 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 JRKLQ9Y4A0 524 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 TSR1Q2NL82 804 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 CEP164Q9UPV0 1460 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 TRIM29Q14134 588 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 FAM76AQ8TAV0 307 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 LRRCC1Q9C099 1032 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 DONSONQ9NYP3 566 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 TRIM21P19474 475 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 CCDC73Q6ZRK6 1079 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 PPP1R9BQ96SB3 815 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 NEBLO76041 1014 aa6.28□□□□□ -1.4
TNRC6B-202ENST00000335727 GTF2F1P35269 517 aaKnown RBP eCLIP6.28□□□□□ -1.43e-7■■■■■ 29.2
TNRC6B-202ENST00000335727 ZFYP08048 801 aaPredicted RBP6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 SLC8A1P32418 973 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 HSPA4P34932 840 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 RRP1P56182 461 aaKnown RBP6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 MAP7Q14244 749 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 VEZTQ9HBM0 779 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 DESP17661 470 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 KIF2CQ99661 725 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 PLEKHH2Q8IVE3 1493 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 SPC24Q8NBT2 197 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 MCM4P33991 863 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 PPFIBP2Q8ND30 876 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 UBXN4Q92575 508 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 ELP1O95163 1332 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 PPP2R5AQ15172 486 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 HDGFL1Q5TGJ6 251 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 EXOC8Q8IYI6 725 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 ZNF500O60304 480 aaPredicted RBP6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 KIF5BP33176 963 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 CEP162Q5TB80 1403 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 UTP6Q9NYH9 597 aaKnown RBP6.27□□□□□ -1.41
TNRC6B-202ENST00000335727 EFCAB13Q8IY85 973 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 BAZ1AQ9NRL2 1556 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TTC19Q6DKK2 380 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 CCDC171Q6TFL3 1326 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 G3V3G9 751 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 XRCC6P12956 609 aaKnown RBP eCLIP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 SF3B2Q13435 895 aaKnown RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 NAA25Q14CX7 972 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 DCAF8Q5TAQ9 597 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 VCXQ9H320 206 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 GCKP35557 465 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 ODF2Q5BJF6 829 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 WWC3Q9ULE0 1092 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 PLEKHH1Q9ULM0 1364 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TMCO4Q5TGY1 634 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 LRRC23Q53EV4 343 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TCP11Q8WWU5 503 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 EBAG9O00559 213 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 MTUS2Q5JR59 1369 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 GOLGA5Q8TBA6 731 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TBC1D22AQ8WUA7 517 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 MCTP2Q6DN12 878 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 RINLQ6ZS11 566 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 BECN2A8MW95 431 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 CCDC40Q4G0X9 1142 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 ANKRD13AQ8IZ07 590 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TUBA8Q9NY65 449 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 RNF8O76064 485 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 CTCFLQ8NI51 663 aaPredicted RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 USP6NLQ92738 828 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 TTC14Q96N46 770 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 REC8O95072 547 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 NAP1L4Q99733 375 aaKnown RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 ZCCHC6Q5VYS8 1495 aaKnown RBP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 SMTNL1A8MU46 457 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 SAFB2Q14151 953 aaKnown RBP eCLIP6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 ARFGAP3Q9NP61 516 aa6.26□□□□□ -1.41
TNRC6B-202ENST00000335727 IBTKQ9P2D0 1353 aaPredicted RBP6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 MCM2P49736 904 aa6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 CLNS1AP54105 237 aaKnown RBP6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 ATP8B1O43520 1251 aa6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 CCDC7Q96M83 1385 aa6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 RWDD2BP57060 319 aa6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
TNRC6B-202ENST00000335727 SMG6Q86US8 1419 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms