RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.39
SF1-202ENST00000334944 GOLGA6L3A6NEY3 463 aa17.51■□□□□ 0.39
SF1-202ENST00000334944 TNRQ92752 1358 aa17.51■□□□□ 0.39
SF1-202ENST00000334944 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
SF1-202ENST00000334944 AEBP1Q8IUX7 1158 aa17.51■□□□□ 0.39
SF1-202ENST00000334944 IL13P35225 146 aa17.51■□□□□ 0.39
SF1-202ENST00000334944 CPS1P31327 1500 aa17.5■□□□□ 0.39
SF1-202ENST00000334944 ARID3AQ99856 593 aa17.5■□□□□ 0.39
SF1-202ENST00000334944 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
SF1-202ENST00000334944 MAP2P11137 1827 aaKnown RBP17.5■□□□□ 0.39
SF1-202ENST00000334944 USP19O94966 1318 aa17.5■□□□□ 0.39
SF1-202ENST00000334944 MED14O60244 1454 aa17.49■□□□□ 0.39
SF1-202ENST00000334944 NRXN3Q9Y4C0 1643 aa17.49■□□□□ 0.39
SF1-202ENST00000334944 NFE2L2Q16236 605 aa17.49■□□□□ 0.39
SF1-202ENST00000334944 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
SF1-202ENST00000334944 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
SF1-202ENST00000334944 RBM10P98175 930 aaKnown RBP17.48■□□□□ 0.39
SF1-202ENST00000334944 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
SF1-202ENST00000334944 ATP7BP35670 1465 aa17.47■□□□□ 0.39
SF1-202ENST00000334944 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
SF1-202ENST00000334944 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
SF1-202ENST00000334944 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
SF1-202ENST00000334944 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
SF1-202ENST00000334944 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
SF1-202ENST00000334944 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
SF1-202ENST00000334944 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
SF1-202ENST00000334944 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.38
SF1-202ENST00000334944 KRT24Q2M2I5 525 aa17.46■□□□□ 0.38
SF1-202ENST00000334944 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.38
SF1-202ENST00000334944 ACEP12821 1306 aa17.46■□□□□ 0.38
SF1-202ENST00000334944 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
SF1-202ENST00000334944 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
SF1-202ENST00000334944 IL16Q14005 1332 aa17.45■□□□□ 0.38
SF1-202ENST00000334944 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
SF1-202ENST00000334944 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
SF1-202ENST00000334944 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
SF1-202ENST00000334944 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
SF1-202ENST00000334944 VAMP4O75379 141 aa17.43■□□□□ 0.38
SF1-202ENST00000334944 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SF1-202ENST00000334944 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
SF1-202ENST00000334944 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
SF1-202ENST00000334944 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
SF1-202ENST00000334944 MCM10Q7L590 875 aa17.42■□□□□ 0.38
SF1-202ENST00000334944 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
SF1-202ENST00000334944 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
SF1-202ENST00000334944 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
SF1-202ENST00000334944 ESPNB1AK53 854 aa17.41■□□□□ 0.38
SF1-202ENST00000334944 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
SF1-202ENST00000334944 TTC21BQ7Z4L5 1316 aa17.41■□□□□ 0.38
SF1-202ENST00000334944 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
SF1-202ENST00000334944 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SF1-202ENST00000334944 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
SF1-202ENST00000334944 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
SF1-202ENST00000334944 MFAP1P55081 439 aaKnown RBP17.4■□□□□ 0.38
SF1-202ENST00000334944 GNAI1P63096 354 aa17.39■□□□□ 0.37
SF1-202ENST00000334944 AAMPQ13685 434 aa17.39■□□□□ 0.37
SF1-202ENST00000334944 BECN1Q14457 450 aa17.39■□□□□ 0.37
SF1-202ENST00000334944 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
SF1-202ENST00000334944 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
SF1-202ENST00000334944 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
SF1-202ENST00000334944 FOXO3O43524 673 aa17.37■□□□□ 0.37
SF1-202ENST00000334944 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
SF1-202ENST00000334944 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
SF1-202ENST00000334944 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
SF1-202ENST00000334944 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
SF1-202ENST00000334944 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
SF1-202ENST00000334944 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
SF1-202ENST00000334944 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
SF1-202ENST00000334944 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
SF1-202ENST00000334944 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
SF1-202ENST00000334944 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
SF1-202ENST00000334944 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
SF1-202ENST00000334944 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 MCM4P33991 863 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 ANKRD45Q5TZF3 282 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
SF1-202ENST00000334944 TRAK2O60296 914 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
SF1-202ENST00000334944 TECPR2O15040 1411 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 KIAA1211Q6ZU35 1233 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
SF1-202ENST00000334944 TRIM44Q96DX7 344 aaPredicted RBP17.34■□□□□ 0.37
SF1-202ENST00000334944 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.37
SF1-202ENST00000334944 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.37
SF1-202ENST00000334944 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.36
SF1-202ENST00000334944 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
SF1-202ENST00000334944 GRPEL1Q9HAV7 217 aa17.32■□□□□ 0.36
SF1-202ENST00000334944 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
SF1-202ENST00000334944 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
SF1-202ENST00000334944 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
SF1-202ENST00000334944 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
SF1-202ENST00000334944 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
SF1-202ENST00000334944 SIRT2Q8IXJ6 389 aa17.31■□□□□ 0.36
SF1-202ENST00000334944 APBB1O00213 710 aa17.31■□□□□ 0.36
SF1-202ENST00000334944 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
SF1-202ENST00000334944 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
SF1-202ENST00000334944 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms