RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 WDR17Q8IZU2 1322 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 GCP02774 474 aa9.16□□□□□ -0.94
USP16-201ENST00000334352 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
USP16-201ENST00000334352 PLSCR1O15162 318 aa9.16□□□□□ -0.94
USP16-201ENST00000334352 HMGB2P26583 209 aaKnown RBP9.15□□□□□ -0.94
USP16-201ENST00000334352 PRDM11Q9NQV5 511 aa9.15□□□□□ -0.94
USP16-201ENST00000334352 NSD2O96028 1365 aa9.15□□□□□ -0.94
USP16-201ENST00000334352 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
USP16-201ENST00000334352 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
USP16-201ENST00000334352 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
USP16-201ENST00000334352 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
USP16-201ENST00000334352 KTN1Q86UP2 1357 aaKnown RBP9.13□□□□□ -0.95
USP16-201ENST00000334352 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
USP16-201ENST00000334352 TESK2Q96S53 571 aa9.13□□□□□ -0.95
USP16-201ENST00000334352 HIRIP3Q9BW71 556 aaPredicted RBP9.13□□□□□ -0.95
USP16-201ENST00000334352 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
USP16-201ENST00000334352 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
USP16-201ENST00000334352 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
USP16-201ENST00000334352 NUTM2FA1L443 756 aa9.11□□□□□ -0.95
USP16-201ENST00000334352 SRPK2P78362 688 aaKnown RBP9.11□□□□□ -0.95
USP16-201ENST00000334352 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP16-201ENST00000334352 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
USP16-201ENST00000334352 BCL11BQ9C0K0 894 aaPredicted RBP9.11□□□□□ -0.95
USP16-201ENST00000334352 CABP2Q9NPB3 220 aa9.11□□□□□ -0.95
USP16-201ENST00000334352 BTAF1O14981 1849 aa9.11□□□□□ -0.95
USP16-201ENST00000334352 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
USP16-201ENST00000334352 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
USP16-201ENST00000334352 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
USP16-201ENST00000334352 CDCA8Q53HL2 280 aa9.09□□□□□ -0.95
USP16-201ENST00000334352 A0A1W2PP64 1363 aa9.09□□□□□ -0.95
USP16-201ENST00000334352 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
USP16-201ENST00000334352 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
USP16-201ENST00000334352 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
USP16-201ENST00000334352 IP6K1Q92551 441 aa9.07□□□□□ -0.96
USP16-201ENST00000334352 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
USP16-201ENST00000334352 ERBB3P21860 1342 aa9.07□□□□□ -0.96
USP16-201ENST00000334352 EVA1CP58658 441 aa9.07□□□□□ -0.96
USP16-201ENST00000334352 NLRP6P59044 892 aa9.07□□□□□ -0.96
USP16-201ENST00000334352 SIN3AQ96ST3 1273 aa9.07□□□□□ -0.96
USP16-201ENST00000334352 TUBGCP6Q96RT7 1819 aa9.06□□□□□ -0.96
USP16-201ENST00000334352 DOT1LQ8TEK3 1739 aa9.06□□□□□ -0.96
USP16-201ENST00000334352 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
USP16-201ENST00000334352 C5P01031 1676 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 ADAMTS7Q9UKP4 1686 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 INSRP06213 1382 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 RGPD2P0DJD1 1756 aa9.05□□□□□ -0.96
USP16-201ENST00000334352 NBPF14Q5TI25 921 aa9.04□□□□□ -0.96
USP16-201ENST00000334352 ZC3H6P61129 1189 aaKnown RBP9.04□□□□□ -0.96
USP16-201ENST00000334352 LMOD2Q6P5Q4 547 aa9.04□□□□□ -0.96
USP16-201ENST00000334352 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
USP16-201ENST00000334352 MAP2P11137 1827 aaKnown RBP9.03□□□□□ -0.96
USP16-201ENST00000334352 DDB1Q16531 1140 aa9.03□□□□□ -0.96
USP16-201ENST00000334352 USP47Q96K76 1375 aa9.03□□□□□ -0.96
USP16-201ENST00000334352 CHRNA2Q15822 529 aa9.03□□□□□ -0.96
USP16-201ENST00000334352 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
USP16-201ENST00000334352 TOGARAM1Q9Y4F4 1720 aa9.03□□□□□ -0.96
USP16-201ENST00000334352 TMF1P82094 1093 aa9.02□□□□□ -0.96
USP16-201ENST00000334352 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.96
USP16-201ENST00000334352 SLC27A3Q5K4L6 730 aa9.02□□□□□ -0.97
USP16-201ENST00000334352 DEFB132Q7Z7B7 95 aa9.02□□□□□ -0.97
USP16-201ENST00000334352 ITGB4P16144 1822 aa9.01□□□□□ -0.97
USP16-201ENST00000334352 KIF13BQ9NQT8 1826 aa9.01□□□□□ -0.97
USP16-201ENST00000334352 EZH2Q15910 746 aaKnown RBP9.01□□□□□ -0.97
USP16-201ENST00000334352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.01□□□□□ -0.971e-6■■■■□ 22.7
USP16-201ENST00000334352 IL2RBP14784 551 aa9.01□□□□□ -0.97
USP16-201ENST00000334352 EXOC5O00471 708 aa9□□□□□ -0.97
USP16-201ENST00000334352 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
USP16-201ENST00000334352 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
USP16-201ENST00000334352 FLT4P35916 1363 aa9□□□□□ -0.97
USP16-201ENST00000334352 APBA3O96018 575 aa9□□□□□ -0.97
USP16-201ENST00000334352 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
USP16-201ENST00000334352 COL5A3P25940 1745 aaPredicted RBP9□□□□□ -0.97
USP16-201ENST00000334352 MAP3K19Q56UN5 1328 aa9□□□□□ -0.97
USP16-201ENST00000334352 TOM1L2Q6ZVM7 507 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 NSD3Q9BZ95 1437 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 KCNQ2O43526 872 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 TRIM37O94972 964 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 HOXC9P31274 260 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 SGIP1Q9BQI5 828 aa8.99□□□□□ -0.97
USP16-201ENST00000334352 ANKRD24Q8TF21 1146 aa8.98□□□□□ -0.97
USP16-201ENST00000334352 NME9Q86XW9 330 aa8.98□□□□□ -0.97
USP16-201ENST00000334352 COG3Q96JB2 828 aa8.98□□□□□ -0.97
USP16-201ENST00000334352 ST20-MTHFSA0A0A6YYL1 179 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 PROM2Q8N271 834 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 MEGF6O75095 1541 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 UBR3Q6ZT12 1888 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 FYB1O15117 783 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 WASHC2AQ641Q2 1341 aa8.97□□□□□ -0.97
USP16-201ENST00000334352 MRC1P22897 1456 aa8.96□□□□□ -0.97
USP16-201ENST00000334352 NUTM2GQ5VZR2 741 aa8.96□□□□□ -0.97
USP16-201ENST00000334352 C4BP0C0L5 1744 aa8.96□□□□□ -0.98
USP16-201ENST00000334352 SPON1Q9HCB6 807 aa8.96□□□□□ -0.98
USP16-201ENST00000334352 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
USP16-201ENST00000334352 KIAA1551Q9HCM1 1747 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms