RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MRPL50Q8N5N7 158 aaKnown RBP29.34■■■□□ 2.29
TSKU-201ENST00000333090 MLECQ14165 292 aa29.34■■■□□ 2.29
TSKU-201ENST00000333090 HDGFL2Q7Z4V5 671 aaPredicted RBP29.33■■■□□ 2.29
TSKU-201ENST00000333090 GOLGA6L22H0YM25 854 aa29.33■■■□□ 2.29
TSKU-201ENST00000333090 HSP90AA2PQ14568 343 aaPredicted RBP29.33■■■□□ 2.29
TSKU-201ENST00000333090 NEO1Q92859 1461 aa29.32■■■□□ 2.28
TSKU-201ENST00000333090 LRRC7Q96NW7 1537 aa29.32■■■□□ 2.28
TSKU-201ENST00000333090 CD163L1Q9NR16 1453 aa29.32■■■□□ 2.28
TSKU-201ENST00000333090 HMOX1P09601 288 aa29.31■■■□□ 2.28
TSKU-201ENST00000333090 FAM69CQ0P6D2 419 aa29.31■■■□□ 2.28
TSKU-201ENST00000333090 ARHGAP45Q92619 1136 aa29.3■■■□□ 2.28
TSKU-201ENST00000333090 PHACTR3Q96KR7 559 aa29.3■■■□□ 2.28
TSKU-201ENST00000333090 CDC45O75419 566 aa29.3■■■□□ 2.28
TSKU-201ENST00000333090 DDX49Q9Y6V7 483 aaKnown RBP29.29■■■□□ 2.28
TSKU-201ENST00000333090 GLIPR1L2Q4G1C9 344 aa29.29■■■□□ 2.28
TSKU-201ENST00000333090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.29■■■□□ 2.28
TSKU-201ENST00000333090 CABP1Q9NZU7 370 aa29.29■■■□□ 2.28
TSKU-201ENST00000333090 STAG3Q9UJ98 1225 aa29.29■■■□□ 2.28
TSKU-201ENST00000333090 PIK3C2BO00750 1634 aa29.28■■■□□ 2.28
TSKU-201ENST00000333090 PTCH1Q13635 1447 aa29.28■■■□□ 2.28
TSKU-201ENST00000333090 FAM135BQ49AJ0 1406 aa29.28■■■□□ 2.28
TSKU-201ENST00000333090 ANKRD26Q9UPS8 1709 aa29.27■■■□□ 2.28
TSKU-201ENST00000333090 PIK3R4Q99570 1358 aa29.27■■■□□ 2.28
TSKU-201ENST00000333090 NASPP49321 788 aaPredicted RBP29.27■■■□□ 2.28
TSKU-201ENST00000333090 NFE2L2Q16236 605 aa29.27■■■□□ 2.28
TSKU-201ENST00000333090 MYO5BQ9ULV0 1848 aa29.27■■■□□ 2.28
TSKU-201ENST00000333090 BAG4O95429 457 aaKnown RBP29.26■■■□□ 2.27
TSKU-201ENST00000333090 ZFYVE9O95405 1425 aa29.25■■■□□ 2.27
TSKU-201ENST00000333090 RRP9O43818 475 aaKnown RBP29.25■■■□□ 2.27
TSKU-201ENST00000333090 GSPT1P15170 499 aaKnown RBP29.25■■■□□ 2.27
TSKU-201ENST00000333090 POLKQ9UBT6 870 aa29.25■■■□□ 2.27
TSKU-201ENST00000333090 ABCC4O15439 1325 aa29.25■■■□□ 2.27
TSKU-201ENST00000333090 SLC52A1Q9NWF4 448 aa29.25■■■□□ 2.27
TSKU-201ENST00000333090 PTPRMP28827 1452 aa29.25■■■□□ 2.27
TSKU-201ENST00000333090 CCDC173Q0VFZ6 552 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 KLHL40Q2TBA0 621 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 GNAI1P63096 354 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 CALD1Q05682 793 aaKnown RBP29.24■■■□□ 2.27
TSKU-201ENST00000333090 MBIPQ9NS73 344 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 RICTORQ6R327 1708 aa29.24■■■□□ 2.27
TSKU-201ENST00000333090 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
TSKU-201ENST00000333090 ANP32BQ92688 251 aaKnown RBP29.22■■■□□ 2.27
TSKU-201ENST00000333090 TWISTNBQ3B726 338 aaPredicted RBP29.22■■■□□ 2.27
TSKU-201ENST00000333090 CLEC17AQ6ZS10 378 aa29.22■■■□□ 2.27
TSKU-201ENST00000333090 IFT57Q9NWB7 429 aa29.22■■■□□ 2.27
TSKU-201ENST00000333090 PLEKHM2Q8IWE5 1019 aa29.21■■■□□ 2.27
TSKU-201ENST00000333090 RABEP1Q15276 862 aa29.2■■■□□ 2.26
TSKU-201ENST00000333090 MCTP1Q6DN14 999 aa29.2■■■□□ 2.26
TSKU-201ENST00000333090 YTHDC2Q9H6S0 1430 aaKnown RBP29.19■■■□□ 2.26
TSKU-201ENST00000333090 PPP1R9BQ96SB3 815 aa29.19■■■□□ 2.26
TSKU-201ENST00000333090 AK9Q5TCS8 1911 aa29.19■■■□□ 2.26
TSKU-201ENST00000333090 NCLP19338 710 aaKnown RBP29.18■■■□□ 2.26
TSKU-201ENST00000333090 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
TSKU-201ENST00000333090 C8orf58Q8NAV2 365 aa29.18■■■□□ 2.26
TSKU-201ENST00000333090 API5Q9BZZ5 524 aaKnown RBP29.17■■■□□ 2.26
TSKU-201ENST00000333090 ARHGAP31Q2M1Z3 1444 aa29.17■■■□□ 2.26
TSKU-201ENST00000333090 IBTKQ9P2D0 1353 aaPredicted RBP29.16■■■□□ 2.26
TSKU-201ENST00000333090 EMILIN1Q9Y6C2 1016 aa29.16■■■□□ 2.26
TSKU-201ENST00000333090 ZNF853P0CG23 659 aa29.15■■■□□ 2.26
TSKU-201ENST00000333090 C16orf71Q8IYS4 520 aaPredicted RBP29.15■■■□□ 2.26
TSKU-201ENST00000333090 ZSCAN30Q86W11 494 aa29.15■■■□□ 2.26
TSKU-201ENST00000333090 TTC22Q5TAA0 569 aa29.14■■■□□ 2.26
TSKU-201ENST00000333090 CAVIN1Q6NZI2 390 aaKnown RBP29.14■■■□□ 2.26
TSKU-201ENST00000333090 NUCB2P80303 420 aa29.14■■■□□ 2.26
TSKU-201ENST00000333090 PKP1Q13835 747 aa29.13■■■□□ 2.25
TSKU-201ENST00000333090 DCTPP1Q9H773 170 aa29.13■■■□□ 2.25
TSKU-201ENST00000333090 USP26Q9BXU7 913 aa29.13■■■□□ 2.25
TSKU-201ENST00000333090 TSPOAP1O95153 1857 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 KIF20BQ96Q89 1820 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 VSIG10Q8N0Z9 540 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 REREQ9P2R6 1566 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 CFAP44Q96MT7 982 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 TMEM131LA2VDJ0 1609 aa29.12■■■□□ 2.25
TSKU-201ENST00000333090 CLTCQ00610 1675 aaKnown RBP29.12■■■□□ 2.25
TSKU-201ENST00000333090 KIAA1211Q6ZU35 1233 aa29.11■■■□□ 2.25
TSKU-201ENST00000333090 PREX1Q8TCU6 1659 aa29.11■■■□□ 2.25
TSKU-201ENST00000333090 FAM83GA6ND36 823 aa29.11■■■□□ 2.25
TSKU-201ENST00000333090 TPM2P07951 284 aa29.11■■■□□ 2.25
TSKU-201ENST00000333090 MSNP26038 577 aaKnown RBP29.1■■■□□ 2.25
TSKU-201ENST00000333090 INTS3Q68E01 1043 aaKnown RBP29.1■■■□□ 2.25
TSKU-201ENST00000333090 OTUD7AQ8TE49 926 aaPredicted RBP29.1■■■□□ 2.25
TSKU-201ENST00000333090 ZNF445P59923 1031 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 ARHGEF40Q8TER5 1519 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 IL13P35225 146 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 ZSCAN23Q3MJ62 389 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 LMBRD1Q9NUN5 540 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 NCKAP5LQ9HCH0 1330 aa29.09■■■□□ 2.25
TSKU-201ENST00000333090 APBB1O00213 710 aa29.08■■■□□ 2.25
TSKU-201ENST00000333090 DCTN1Q14203 1278 aa29.08■■■□□ 2.25
TSKU-201ENST00000333090 CYP2E1P05181 493 aaPredicted RBP29.07■■■□□ 2.24
TSKU-201ENST00000333090 LMOD3Q0VAK6 560 aa29.07■■■□□ 2.24
TSKU-201ENST00000333090 ZGPATQ8N5A5 531 aaKnown RBP29.05■■■□□ 2.24
TSKU-201ENST00000333090 MAP2P11137 1827 aaKnown RBP29.05■■■□□ 2.24
TSKU-201ENST00000333090 KNDC1Q76NI1 1749 aa29.05■■■□□ 2.24
TSKU-201ENST00000333090 SDSP20132 328 aa29.05■■■□□ 2.24
TSKU-201ENST00000333090 ZRANB1Q9UGI0 708 aa29.05■■■□□ 2.24
TSKU-201ENST00000333090 ST18O60284 1047 aa29.04■■■□□ 2.24
TSKU-201ENST00000333090 PRPF40AO75400 957 aaKnown RBP29.04■■■□□ 2.24
TSKU-201ENST00000333090 SMARCA5O60264 1052 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms