RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 UTRNP46939 3433 aa11.56□□□□□ -0.56
CCNC-201ENST00000326298 ST20-MTHFSA0A0A6YYL1 179 aa11.56□□□□□ -0.56
CCNC-201ENST00000326298 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
CCNC-201ENST00000326298 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
CCNC-201ENST00000326298 APBA3O96018 575 aa11.55□□□□□ -0.56
CCNC-201ENST00000326298 FBLN1P23142 703 aa11.55□□□□□ -0.56
CCNC-201ENST00000326298 TOM1L2Q6ZVM7 507 aa11.55□□□□□ -0.56
CCNC-201ENST00000326298 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
CCNC-201ENST00000326298 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
CCNC-201ENST00000326298 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
CCNC-201ENST00000326298 LRRC37A3O60309 1634 aa11.54□□□□□ -0.56
CCNC-201ENST00000326298 WDR17Q8IZU2 1322 aa11.54□□□□□ -0.56
CCNC-201ENST00000326298 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
CCNC-201ENST00000326298 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
CCNC-201ENST00000326298 THRAP3Q9Y2W1 955 aaKnown RBP11.54□□□□□ -0.56
CCNC-201ENST00000326298 MARCH10Q8NA82 808 aaPredicted RBP11.53□□□□□ -0.56
CCNC-201ENST00000326298 USP31Q70CQ4 1352 aa11.52□□□□□ -0.57
CCNC-201ENST00000326298 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
CCNC-201ENST00000326298 DDB1Q16531 1140 aa11.51□□□□□ -0.57
CCNC-201ENST00000326298 WNK3Q9BYP7 1800 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 OVOS2A0A0J9YW53 1432 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 NUP188Q5SRE5 1749 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 OVOS2Q6IE36 1432 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
CCNC-201ENST00000326298 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 RREB1Q92766 1687 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
CCNC-201ENST00000326298 PROM2Q8N271 834 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 LTN1O94822 1766 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 ERBB3P21860 1342 aa11.49□□□□□ -0.57
CCNC-201ENST00000326298 OVOS2A0A0G2JMS6 1433 aa11.48□□□□□ -0.57
CCNC-201ENST00000326298 KCNQ2O43526 872 aa11.48□□□□□ -0.57
CCNC-201ENST00000326298 HDGFL2Q7Z4V5 671 aaPredicted RBP11.48□□□□□ -0.57
CCNC-201ENST00000326298 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
CCNC-201ENST00000326298 GOLGB1Q14789 3259 aaKnown RBP11.48□□□□□ -0.57
CCNC-201ENST00000326298 LRP5O75197 1615 aa11.48□□□□□ -0.57
CCNC-201ENST00000326298 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
CCNC-201ENST00000326298 USP47Q96K76 1375 aa11.47□□□□□ -0.57
CCNC-201ENST00000326298 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
CCNC-201ENST00000326298 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
CCNC-201ENST00000326298 NLRP2Q9NX02 1062 aa11.47□□□□□ -0.57
CCNC-201ENST00000326298 TERF2IPQ9NYB0 399 aa11.47□□□□□ -0.57
CCNC-201ENST00000326298 LTV1Q96GA3 475 aaPredicted RBP11.45□□□□□ -0.58
CCNC-201ENST00000326298 PUS7Q96PZ0 661 aaKnown RBP11.45□□□□□ -0.58
CCNC-201ENST00000326298 ACSBG1Q96GR2 724 aa11.45□□□□□ -0.58
CCNC-201ENST00000326298 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
CCNC-201ENST00000326298 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
CCNC-201ENST00000326298 PARD3Q8TEW0 1356 aa11.44□□□□□ -0.58
CCNC-201ENST00000326298 EXOC5O00471 708 aa11.44□□□□□ -0.58
CCNC-201ENST00000326298 FYB1O15117 783 aa11.44□□□□□ -0.58
CCNC-201ENST00000326298 RRS1Q15050 365 aaKnown RBP11.44□□□□□ -0.58
CCNC-201ENST00000326298 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
CCNC-201ENST00000326298 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 ABCC6O95255 1503 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 PLSCR1O15162 318 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 IP6K1Q92551 441 aa11.43□□□□□ -0.58
CCNC-201ENST00000326298 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
CCNC-201ENST00000326298 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
CCNC-201ENST00000326298 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
CCNC-201ENST00000326298 BCL9O00512 1426 aa11.42□□□□□ -0.58
CCNC-201ENST00000326298 IL2RBP14784 551 aa11.41□□□□□ -0.58
CCNC-201ENST00000326298 HOXC9P31274 260 aa11.41□□□□□ -0.58
CCNC-201ENST00000326298 COG3Q96JB2 828 aa11.41□□□□□ -0.58
CCNC-201ENST00000326298 TMF1P82094 1093 aa11.4□□□□□ -0.58
CCNC-201ENST00000326298 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
CCNC-201ENST00000326298 MYOM1P52179 1685 aa11.4□□□□□ -0.58
CCNC-201ENST00000326298 TXNRD1Q16881 649 aa11.4□□□□□ -0.58
CCNC-201ENST00000326298 NINLQ9Y2I6 1382 aa11.4□□□□□ -0.58
CCNC-201ENST00000326298 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
CCNC-201ENST00000326298 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
CCNC-201ENST00000326298 NBPF6Q5VWK0 638 aa11.39□□□□□ -0.59
CCNC-201ENST00000326298 DDX54Q8TDD1 881 aaKnown RBP11.39□□□□□ -0.59
CCNC-201ENST00000326298 NBPF4Q96M43 638 aa11.39□□□□□ -0.59
CCNC-201ENST00000326298 RGPD3A6NKT7 1758 aaPredicted RBP11.39□□□□□ -0.59
CCNC-201ENST00000326298 RGPD4Q7Z3J3 1758 aa11.39□□□□□ -0.59
CCNC-201ENST00000326298 KAT6BQ8WYB5 2073 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 MEGF6O75095 1541 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 AMPHP49418 695 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 KCNQ4P56696 695 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 LRRC4BQ9NT99 713 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
CCNC-201ENST00000326298 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
CCNC-201ENST00000326298 ZBTB7AO95365 584 aa11.37□□□□□ -0.59
CCNC-201ENST00000326298 CASZ1Q86V15 1759 aa11.37□□□□□ -0.59
CCNC-201ENST00000326298 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
CCNC-201ENST00000326298 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
CCNC-201ENST00000326298 BTAF1O14981 1849 aa11.36□□□□□ -0.59
CCNC-201ENST00000326298 NSD3Q9BZ95 1437 aa11.36□□□□□ -0.59
CCNC-201ENST00000326298 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
CCNC-201ENST00000326298 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
CCNC-201ENST00000326298 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
CCNC-201ENST00000326298 PTGER2P43116 358 aa11.34□□□□□ -0.59
CCNC-201ENST00000326298 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
CCNC-201ENST00000326298 NSD2O96028 1365 aa11.34□□□□□ -0.59
CCNC-201ENST00000326298 PAPPAQ13219 1627 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms