RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SMC2O95347 1197 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 ACBD3Q9H3P7 528 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 AK7Q96M32 723 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.32
SNRNP200-201ENST00000323853 FIBPO43427 364 aa13.02□□□□□ -0.32
SNRNP200-201ENST00000323853 NAP1L1P55209 391 aaKnown RBP13.02□□□□□ -0.32
SNRNP200-201ENST00000323853 NFE2L2Q16236 605 aa13.02□□□□□ -0.33
SNRNP200-201ENST00000323853 CCP110O43303 1012 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 PRM3Q9NNZ6 103 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.01□□□□□ -0.333e-7■■■□□ 15.2
SNRNP200-201ENST00000323853 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
SNRNP200-201ENST00000323853 STK3Q13188 491 aa13□□□□□ -0.33
SNRNP200-201ENST00000323853 ZNF428Q96B54 188 aa13□□□□□ -0.33
SNRNP200-201ENST00000323853 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
SNRNP200-201ENST00000323853 SIL1Q9H173 461 aa13□□□□□ -0.33
SNRNP200-201ENST00000323853 CABP4P57796 275 aa13□□□□□ -0.33
SNRNP200-201ENST00000323853 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
SNRNP200-201ENST00000323853 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
SNRNP200-201ENST00000323853 CEBPZQ03701 1054 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 STK38Q15208 465 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 MAP7D2Q96T17 732 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 SLC3A2P08195 630 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 EPS15P42566 896 aa12.99□□□□□ -0.33
SNRNP200-201ENST00000323853 AACSQ86V21 672 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 RPAP2Q8IXW5 612 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 TNMDQ9H2S6 317 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 SPC24Q8NBT2 197 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
SNRNP200-201ENST00000323853 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 RRP12Q5JTH9 1297 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 MYL6BP14649 208 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
SNRNP200-201ENST00000323853 RPRD2Q5VT52 1461 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-201ENST00000323853 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
SNRNP200-201ENST00000323853 ABCC11Q96J66 1382 aa12.96□□□□□ -0.33
SNRNP200-201ENST00000323853 MCM4P33991 863 aa12.96□□□□□ -0.33
SNRNP200-201ENST00000323853 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.34
SNRNP200-201ENST00000323853 SRGAP3O43295 1099 aa12.96□□□□□ -0.34
SNRNP200-201ENST00000323853 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.34
SNRNP200-201ENST00000323853 KRT85P78386 507 aa12.96□□□□□ -0.34
SNRNP200-201ENST00000323853 HSP90B2PQ58FF3 399 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 CDR1P51861 262 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 TXLNAP40222 546 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 DHX8Q14562 1220 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 JMYQ8N9B5 988 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 TTLL5Q6EMB2 1281 aa12.95□□□□□ -0.34
SNRNP200-201ENST00000323853 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-201ENST00000323853 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 SERPINC1P01008 464 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 ME1P48163 572 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 ADGRL1O94910 1474 aa12.93□□□□□ -0.34
SNRNP200-201ENST00000323853 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms