RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 SNX21Q969T3 373 aa11.9□□□□□ -0.5
RPGR-201ENST00000318842 MAP3K4Q9Y6R4 1608 aa11.9□□□□□ -0.51
RPGR-201ENST00000318842 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 MCM10Q7L590 875 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 ZSCAN30Q86W11 494 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
RPGR-201ENST00000318842 ABCC1P33527 1531 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
RPGR-201ENST00000318842 NME9Q86XW9 330 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
RPGR-201ENST00000318842 SDSP20132 328 aa11.89□□□□□ -0.51
RPGR-201ENST00000318842 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
RPGR-201ENST00000318842 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
RPGR-201ENST00000318842 ZFYVE16Q7Z3T8 1539 aa11.88□□□□□ -0.51
RPGR-201ENST00000318842 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
RPGR-201ENST00000318842 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
RPGR-201ENST00000318842 UQCRHP07919 91 aa11.88□□□□□ -0.51
RPGR-201ENST00000318842 MEIS3Q99687 375 aa11.88□□□□□ -0.51
RPGR-201ENST00000318842 CDC45O75419 566 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 TULP4Q9NRJ4 1543 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
RPGR-201ENST00000318842 IGSF3O75054 1194 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
RPGR-201ENST00000318842 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
RPGR-201ENST00000318842 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
RPGR-201ENST00000318842 IDI1Q13907 227 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 KLHL40Q2TBA0 621 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 QRICH2Q9H0J4 1663 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 FANCAO15360 1455 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 ANKRD36BQ8N2N9 1353 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 NEK4P51957 841 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 ANP32BQ92688 251 aaKnown RBP11.86□□□□□ -0.51
RPGR-201ENST00000318842 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
RPGR-201ENST00000318842 IL25Q9H293 177 aa11.85□□□□□ -0.51
RPGR-201ENST00000318842 NPATQ14207 1427 aa11.85□□□□□ -0.51
RPGR-201ENST00000318842 FOXO3O43524 673 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 G2E3Q7L622 706 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 CHD1O14646 1710 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 OFD1O75665 1012 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 PTMAP06454 111 aaKnown RBP11.84□□□□□ -0.51
RPGR-201ENST00000318842 CPA1P15085 419 aa11.84□□□□□ -0.51
RPGR-201ENST00000318842 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
RPGR-201ENST00000318842 A0A0U1RQG5 324 aaPredicted RBP11.83□□□□□ -0.52
RPGR-201ENST00000318842 RILPL2Q969X0 211 aa11.83□□□□□ -0.52
RPGR-201ENST00000318842 PPP1R9BQ96SB3 815 aa11.83□□□□□ -0.52
RPGR-201ENST00000318842 TTC12Q9H892 705 aaPredicted RBP11.83□□□□□ -0.52
RPGR-201ENST00000318842 ATP7AQ04656 1500 aa11.83□□□□□ -0.52
RPGR-201ENST00000318842 ZCCHC11Q5TAX3 1644 aaKnown RBP11.83□□□□□ -0.52
RPGR-201ENST00000318842 DNTTIP2Q5QJE6 756 aaKnown RBP11.83□□□□□ -0.52
RPGR-201ENST00000318842 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
RPGR-201ENST00000318842 UNC5CLQ8IV45 518 aa11.82□□□□□ -0.52
RPGR-201ENST00000318842 SKOR2Q2VWA4 1001 aaPredicted RBP11.82□□□□□ -0.52
RPGR-201ENST00000318842 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
RPGR-201ENST00000318842 ABCC11Q96J66 1382 aa11.82□□□□□ -0.52
RPGR-201ENST00000318842 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
RPGR-201ENST00000318842 MSH6P52701 1360 aa11.81□□□□□ -0.52
RPGR-201ENST00000318842 AAMPQ13685 434 aa11.81□□□□□ -0.52
RPGR-201ENST00000318842 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
RPGR-201ENST00000318842 USP25Q9UHP3 1055 aa11.81□□□□□ -0.52
RPGR-201ENST00000318842 ADGRB1O14514 1584 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 MLECQ14165 292 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 ANO2Q9NQ90 1003 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 TET3O43151 1660 aa11.8□□□□□ -0.52
RPGR-201ENST00000318842 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPGR-201ENST00000318842 TPM2P07951 284 aa11.79□□□□□ -0.52
RPGR-201ENST00000318842 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
RPGR-201ENST00000318842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPGR-201ENST00000318842 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
RPGR-201ENST00000318842 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
RPGR-201ENST00000318842 CEP85Q6P2H3 762 aa11.79□□□□□ -0.52
RPGR-201ENST00000318842 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
RPGR-201ENST00000318842 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
RPGR-201ENST00000318842 RABEP1Q15276 862 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 MYOM2P54296 1465 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 KIF1BO60333 1816 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 CBX1P83916 185 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 COL9A3Q14050 684 aaPredicted RBP11.78□□□□□ -0.52
RPGR-201ENST00000318842 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 ABCC4O15439 1325 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 ADGRB2O60241 1585 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
RPGR-201ENST00000318842 KNDC1Q76NI1 1749 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms