RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 SLIT2O94813 1529 aa20.74■□□□□ 0.91
HNF4A-202ENST00000316673 CNGB1Q14028 1251 aaPredicted RBP20.74■□□□□ 0.91
HNF4A-202ENST00000316673 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
HNF4A-202ENST00000316673 CHRNA2Q15822 529 aa20.74■□□□□ 0.91
HNF4A-202ENST00000316673 IP6K1Q92551 441 aa20.74■□□□□ 0.91
HNF4A-202ENST00000316673 FLT4P35916 1363 aa20.74■□□□□ 0.91
HNF4A-202ENST00000316673 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
HNF4A-202ENST00000316673 POLKQ9UBT6 870 aa20.73■□□□□ 0.91
HNF4A-202ENST00000316673 CENPBP07199 599 aaPredicted RBP20.72■□□□□ 0.91
HNF4A-202ENST00000316673 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
HNF4A-202ENST00000316673 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
HNF4A-202ENST00000316673 LMO7Q8WWI1 1683 aa20.72■□□□□ 0.91
HNF4A-202ENST00000316673 MRS2Q9HD23 443 aa20.72■□□□□ 0.91
HNF4A-202ENST00000316673 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
HNF4A-202ENST00000316673 AFF2P51816 1311 aa20.71■□□□□ 0.91
HNF4A-202ENST00000316673 FBLN1P23142 703 aa20.71■□□□□ 0.91
HNF4A-202ENST00000316673 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
HNF4A-202ENST00000316673 COL18A1P39060 1754 aa20.71■□□□□ 0.91
HNF4A-202ENST00000316673 HOXC9P31274 260 aa20.7■□□□□ 0.9
HNF4A-202ENST00000316673 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
HNF4A-202ENST00000316673 USP21Q9UK80 565 aa20.7■□□□□ 0.9
HNF4A-202ENST00000316673 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
HNF4A-202ENST00000316673 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
HNF4A-202ENST00000316673 EVA1CP58658 441 aa20.69■□□□□ 0.9
HNF4A-202ENST00000316673 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.69■□□□□ 0.9
HNF4A-202ENST00000316673 INSRP06213 1382 aa20.69■□□□□ 0.9
HNF4A-202ENST00000316673 CAMTA1Q9Y6Y1 1673 aa20.69■□□□□ 0.9
HNF4A-202ENST00000316673 CDK12Q9NYV4 1490 aaPredicted RBP20.68■□□□□ 0.9
HNF4A-202ENST00000316673 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
HNF4A-202ENST00000316673 MTHFSP49914 203 aa20.68■□□□□ 0.9
HNF4A-202ENST00000316673 AXIN2Q9Y2T1 843 aa20.68■□□□□ 0.9
HNF4A-202ENST00000316673 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
HNF4A-202ENST00000316673 COL5A2P05997 1499 aaPredicted RBP20.67■□□□□ 0.9
HNF4A-202ENST00000316673 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
HNF4A-202ENST00000316673 TRPC5Q9UL62 973 aaPredicted RBP20.66■□□□□ 0.9
HNF4A-202ENST00000316673 ERBB3P21860 1342 aa20.65■□□□□ 0.9
HNF4A-202ENST00000316673 PEAK1Q9H792 1746 aa20.65■□□□□ 0.9
HNF4A-202ENST00000316673 WDR17Q8IZU2 1322 aa20.65■□□□□ 0.9
HNF4A-202ENST00000316673 NRAPQ86VF7 1730 aa20.64■□□□□ 0.9
HNF4A-202ENST00000316673 VPS72Q15906 364 aa20.64■□□□□ 0.89
HNF4A-202ENST00000316673 HSP90AB2PQ58FF8 381 aa20.64■□□□□ 0.89
HNF4A-202ENST00000316673 ANKRD24Q8TF21 1146 aa20.64■□□□□ 0.89
HNF4A-202ENST00000316673 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
HNF4A-202ENST00000316673 STRN4Q9NRL3 753 aa20.64■□□□□ 0.89
HNF4A-202ENST00000316673 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
HNF4A-202ENST00000316673 RGPD5Q99666 1765 aa20.63■□□□□ 0.89
HNF4A-202ENST00000316673 FAM208AQ9UK61 1670 aaKnown RBP20.62■□□□□ 0.89
HNF4A-202ENST00000316673 CRB1P82279 1406 aa20.62■□□□□ 0.89
HNF4A-202ENST00000316673 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
HNF4A-202ENST00000316673 QTRT2Q9H974 415 aaKnown RBP20.61■□□□□ 0.89
HNF4A-202ENST00000316673 ATRNO75882 1429 aa20.6■□□□□ 0.89
HNF4A-202ENST00000316673 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
HNF4A-202ENST00000316673 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
HNF4A-202ENST00000316673 CARD10Q9BWT7 1032 aa20.59■□□□□ 0.89
HNF4A-202ENST00000316673 CCDC9Q9Y3X0 531 aaKnown RBP20.59■□□□□ 0.89
HNF4A-202ENST00000316673 NLRP2Q9NX02 1062 aa20.58■□□□□ 0.89
HNF4A-202ENST00000316673 THRAP3Q9Y2W1 955 aaKnown RBP20.58■□□□□ 0.89
HNF4A-202ENST00000316673 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.88
HNF4A-202ENST00000316673 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.88
HNF4A-202ENST00000316673 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
HNF4A-202ENST00000316673 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
HNF4A-202ENST00000316673 GJD4Q96KN9 370 aaPredicted RBP20.57■□□□□ 0.88
HNF4A-202ENST00000316673 NUDCQ9Y266 331 aa20.56■□□□□ 0.88
HNF4A-202ENST00000316673 SPATA31A1Q5TZJ5 1347 aa20.56■□□□□ 0.88
HNF4A-202ENST00000316673 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
HNF4A-202ENST00000316673 TCP11L2Q8N4U5 519 aa20.56■□□□□ 0.88
HNF4A-202ENST00000316673 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
HNF4A-202ENST00000316673 IL13P35225 146 aa20.54■□□□□ 0.88
HNF4A-202ENST00000316673 CDCA7Q9BWT1 371 aaPredicted RBP20.54■□□□□ 0.88
HNF4A-202ENST00000316673 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
HNF4A-202ENST00000316673 RXRBP28702 533 aa20.53■□□□□ 0.88
HNF4A-202ENST00000316673 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
HNF4A-202ENST00000316673 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
HNF4A-202ENST00000316673 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
HNF4A-202ENST00000316673 USP35Q9P2H5 1018 aa20.52■□□□□ 0.88
HNF4A-202ENST00000316673 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
HNF4A-202ENST00000316673 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
HNF4A-202ENST00000316673 EYA1Q99502 592 aa20.51■□□□□ 0.87
HNF4A-202ENST00000316673 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
HNF4A-202ENST00000316673 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.871e-14■■■■□ 20.1
HNF4A-202ENST00000316673 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
HNF4A-202ENST00000316673 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.873e-15■■□□□ 11.4
HNF4A-202ENST00000316673 GLI3P10071 1580 aa20.49■□□□□ 0.87
HNF4A-202ENST00000316673 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
HNF4A-202ENST00000316673 ONECUT3O60422 494 aaPredicted RBP20.49■□□□□ 0.87
HNF4A-202ENST00000316673 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
HNF4A-202ENST00000316673 RGPD2P0DJD1 1756 aa20.47■□□□□ 0.87
HNF4A-202ENST00000316673 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
HNF4A-202ENST00000316673 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
HNF4A-202ENST00000316673 IL2RBP14784 551 aa20.47■□□□□ 0.87
HNF4A-202ENST00000316673 KDRP35968 1356 aa20.46■□□□□ 0.87
HNF4A-202ENST00000316673 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
HNF4A-202ENST00000316673 FAM98CQ17RN3 349 aaKnown RBP20.46■□□□□ 0.87
HNF4A-202ENST00000316673 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
HNF4A-202ENST00000316673 SULT6B1Q6IMI4 303 aa20.44■□□□□ 0.86
HNF4A-202ENST00000316673 USHBP1Q8N6Y0 703 aa20.44■□□□□ 0.86
HNF4A-202ENST00000316673 U2AF1L5P0DN76 240 aaPredicted RBP20.43■□□□□ 0.86
HNF4A-202ENST00000316673 U2AF1Q01081 240 aaKnown RBP eCLIP20.43■□□□□ 0.86
HNF4A-202ENST00000316673 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
HNF4A-202ENST00000316673 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms