RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 PDCL3Q9H2J4 239 aa21.93■■□□□ 1.1
SLC12A4-201ENST00000316341 STK3Q13188 491 aa21.92■■□□□ 1.1
SLC12A4-201ENST00000316341 USP25Q9UHP3 1055 aa21.92■■□□□ 1.1
SLC12A4-201ENST00000316341 TOMM22Q9NS69 142 aa21.92■■□□□ 1.1
SLC12A4-201ENST00000316341 ZSCAN23Q3MJ62 389 aa21.92■■□□□ 1.1
SLC12A4-201ENST00000316341 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
SLC12A4-201ENST00000316341 CCDC30Q5VVM6 783 aa21.91■■□□□ 1.1
SLC12A4-201ENST00000316341 NUTM1Q86Y26 1132 aa21.91■■□□□ 1.1
SLC12A4-201ENST00000316341 CWC27Q6UX04 472 aaKnown RBP21.91■■□□□ 1.1
SLC12A4-201ENST00000316341 KIF14Q15058 1648 aa21.91■■□□□ 1.1
SLC12A4-201ENST00000316341 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 FAM83GA6ND36 823 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 CCDC73Q6ZRK6 1079 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 FERMT3Q86UX7 667 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 FMNL2Q96PY5 1086 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 EID1Q9Y6B2 187 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 LETM1O95202 739 aaPredicted RBP21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 FSD1Q9BTV5 496 aa21.9■■□□□ 1.1
SLC12A4-201ENST00000316341 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.09
SLC12A4-201ENST00000316341 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
SLC12A4-201ENST00000316341 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
SLC12A4-201ENST00000316341 CCT4P50991 539 aaKnown RBP21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 CBX1P83916 185 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 WAPLQ7Z5K2 1190 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 KDM6BO15054 1643 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 CCDC192P0DO97 292 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 SDF4Q9BRK5 362 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
SLC12A4-201ENST00000316341 RAPGEF3O95398 923 aa21.87■■□□□ 1.09
SLC12A4-201ENST00000316341 NLRP6P59044 892 aa21.87■■□□□ 1.09
SLC12A4-201ENST00000316341 NEXNQ0ZGT2 675 aa21.87■■□□□ 1.09
SLC12A4-201ENST00000316341 CAMK4Q16566 473 aa21.87■■□□□ 1.09
SLC12A4-201ENST00000316341 HDGFL1Q5TGJ6 251 aa21.87■■□□□ 1.09
SLC12A4-201ENST00000316341 ZNF830Q96NB3 372 aaPredicted RBP21.86■■□□□ 1.09
SLC12A4-201ENST00000316341 LARP1BQ659C4 914 aaKnown RBP21.86■■□□□ 1.09
SLC12A4-201ENST00000316341 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
SLC12A4-201ENST00000316341 NME9Q86XW9 330 aa21.86■■□□□ 1.09
SLC12A4-201ENST00000316341 ABCC11Q96J66 1382 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 RAB3GAP1Q15042 981 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 COL17A1Q9UMD9 1497 aaPredicted RBP21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 UHRF1BP1Q6BDS2 1440 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 SRGAP3O43295 1099 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 JAKMIP1Q96N16 626 aaKnown RBP21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 MBIPQ9NS73 344 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 CYP46A1Q9Y6A2 500 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 FAM135AQ9P2D6 1515 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 NOS1P29475 1434 aa21.85■■□□□ 1.09
SLC12A4-201ENST00000316341 KDM4AO75164 1064 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 MX1P20591 662 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 TNMDQ9H2S6 317 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 CPLX1O14810 134 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 ATAD2Q6PL18 1390 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 SNX21Q969T3 373 aa21.84■■□□□ 1.09
SLC12A4-201ENST00000316341 TPM3P06753 285 aa21.83■■□□□ 1.09
SLC12A4-201ENST00000316341 SMC5Q8IY18 1101 aa21.83■■□□□ 1.09
SLC12A4-201ENST00000316341 TTC22Q5TAA0 569 aa21.83■■□□□ 1.08
SLC12A4-201ENST00000316341 CCDC83Q8IWF9 413 aa21.83■■□□□ 1.08
SLC12A4-201ENST00000316341 SDSP20132 328 aa21.83■■□□□ 1.08
SLC12A4-201ENST00000316341 ZGPATQ8N5A5 531 aaKnown RBP21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 NEUROD6Q96NK8 337 aa21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 SIL1Q9H173 461 aa21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 CASTP20810 708 aaKnown RBP21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 ZBTB40Q9NUA8 1239 aa21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 ZHX1Q9UKY1 873 aaPredicted RBP21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 PSMA5P28066 241 aa21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 KRT85P78386 507 aa21.82■■□□□ 1.08
SLC12A4-201ENST00000316341 BLMP54132 1417 aaPredicted RBP21.81■■□□□ 1.08
SLC12A4-201ENST00000316341 PES1O00541 588 aaKnown RBP21.81■■□□□ 1.08
SLC12A4-201ENST00000316341 PIK3C2GO75747 1445 aa21.81■■□□□ 1.08
SLC12A4-201ENST00000316341 PDCP20941 246 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 TSPYL6Q8N831 410 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 PDCL2Q8N4E4 241 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 FILIP1Q7Z7B0 1213 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 MNS1Q8NEH6 495 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 CCDC112Q8NEF3 446 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 ARHGEF12Q9NZN5 1544 aa21.8■■□□□ 1.08
SLC12A4-201ENST00000316341 SRCIN1Q9C0H9 1055 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 RAPGEF6Q8TEU7 1601 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 DNAJC2Q99543 621 aaKnown RBP21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 WDR62O43379 1518 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 RIC3Q7Z5B4 369 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 ATP10BO94823 1461 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 TMX3Q96JJ7 454 aa21.79■■□□□ 1.08
SLC12A4-201ENST00000316341 SMC2O95347 1197 aa21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 HCLS1P14317 486 aaPredicted RBP21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 NUP62CLQ9H1M0 184 aa21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 C14orf93Q9H972 538 aaKnown RBP21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 DDX58O95786 925 aaKnown RBP21.78■■□□□ 1.08
SLC12A4-201ENST00000316341 GOLGA6L1Q8N7Z2 621 aa21.77■■□□□ 1.08
SLC12A4-201ENST00000316341 MEIS3Q99687 375 aa21.77■■□□□ 1.08
SLC12A4-201ENST00000316341 ADCY5O95622 1261 aa21.77■■□□□ 1.08
SLC12A4-201ENST00000316341 RASSF8Q8NHQ8 419 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms