RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CHD1LQ86WJ1 897 aa18.61■□□□□ 0.57
TFE3-201ENST00000315869 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
TFE3-201ENST00000315869 HDAC1Q13547 482 aaPredicted RBP18.61■□□□□ 0.57
TFE3-201ENST00000315869 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
TFE3-201ENST00000315869 PPIP5K1Q6PFW1 1433 aa18.6■□□□□ 0.57
TFE3-201ENST00000315869 ZBTB40Q9NUA8 1239 aa18.59■□□□□ 0.57
TFE3-201ENST00000315869 ABCC11Q96J66 1382 aa18.59■□□□□ 0.57
TFE3-201ENST00000315869 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
TFE3-201ENST00000315869 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
TFE3-201ENST00000315869 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
TFE3-201ENST00000315869 CCDC61Q9Y6R9 512 aa18.58■□□□□ 0.57
TFE3-201ENST00000315869 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.57
TFE3-201ENST00000315869 NCLP19338 710 aaKnown RBP18.58■□□□□ 0.56
TFE3-201ENST00000315869 PLEKHF1Q96S99 279 aa18.58■□□□□ 0.56
TFE3-201ENST00000315869 TRIM44Q96DX7 344 aaPredicted RBP18.57■□□□□ 0.56
TFE3-201ENST00000315869 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
TFE3-201ENST00000315869 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
TFE3-201ENST00000315869 NLRP1Q9C000 1473 aa18.56■□□□□ 0.56
TFE3-201ENST00000315869 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
TFE3-201ENST00000315869 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
TFE3-201ENST00000315869 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
TFE3-201ENST00000315869 PHACTR3Q96KR7 559 aa18.55■□□□□ 0.56
TFE3-201ENST00000315869 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
TFE3-201ENST00000315869 KCNA6P17658 529 aa18.55■□□□□ 0.56
TFE3-201ENST00000315869 NUCB1Q02818 461 aa18.55■□□□□ 0.56
TFE3-201ENST00000315869 THEMISQ8N1K5 641 aaPredicted RBP18.55■□□□□ 0.56
TFE3-201ENST00000315869 NSD2O96028 1365 aa18.54■□□□□ 0.56
TFE3-201ENST00000315869 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
TFE3-201ENST00000315869 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
TFE3-201ENST00000315869 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
TFE3-201ENST00000315869 TNPO1Q92973 898 aaKnown RBP18.53■□□□□ 0.56
TFE3-201ENST00000315869 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
TFE3-201ENST00000315869 ACEP12821 1306 aa18.53■□□□□ 0.56
TFE3-201ENST00000315869 COG3Q96JB2 828 aa18.52■□□□□ 0.56
TFE3-201ENST00000315869 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
TFE3-201ENST00000315869 FCHSD2O94868 740 aa18.52■□□□□ 0.55
TFE3-201ENST00000315869 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
TFE3-201ENST00000315869 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
TFE3-201ENST00000315869 MRE11P49959 708 aa18.51■□□□□ 0.55
TFE3-201ENST00000315869 GRPEL1Q9HAV7 217 aa18.51■□□□□ 0.55
TFE3-201ENST00000315869 FAM83GA6ND36 823 aa18.51■□□□□ 0.55
TFE3-201ENST00000315869 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
TFE3-201ENST00000315869 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
TFE3-201ENST00000315869 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
TFE3-201ENST00000315869 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
TFE3-201ENST00000315869 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
TFE3-201ENST00000315869 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
TFE3-201ENST00000315869 IL16Q14005 1332 aa18.48■□□□□ 0.55
TFE3-201ENST00000315869 CD2BP2O95400 341 aaKnown RBP18.48■□□□□ 0.55
TFE3-201ENST00000315869 GNAI1P63096 354 aa18.48■□□□□ 0.55
TFE3-201ENST00000315869 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
TFE3-201ENST00000315869 VAMP4O75379 141 aa18.47■□□□□ 0.55
TFE3-201ENST00000315869 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
TFE3-201ENST00000315869 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
TFE3-201ENST00000315869 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
TFE3-201ENST00000315869 BMP2KLQ5H9B9 411 aa18.47■□□□□ 0.55
TFE3-201ENST00000315869 MBIPQ9NS73 344 aa18.47■□□□□ 0.55
TFE3-201ENST00000315869 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
TFE3-201ENST00000315869 SSFA2P28290 1259 aa18.46■□□□□ 0.55
TFE3-201ENST00000315869 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
TFE3-201ENST00000315869 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
TFE3-201ENST00000315869 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
TFE3-201ENST00000315869 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
TFE3-201ENST00000315869 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
TFE3-201ENST00000315869 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
TFE3-201ENST00000315869 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
TFE3-201ENST00000315869 CPS1P31327 1500 aa18.45■□□□□ 0.54
TFE3-201ENST00000315869 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
TFE3-201ENST00000315869 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
TFE3-201ENST00000315869 PLEKHG1Q9ULL1 1385 aa18.45■□□□□ 0.54
TFE3-201ENST00000315869 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
TFE3-201ENST00000315869 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
TFE3-201ENST00000315869 RBM25P49756 843 aaKnown RBP18.44■□□□□ 0.54
TFE3-201ENST00000315869 HSP90AB2PQ58FF8 381 aa18.44■□□□□ 0.54
TFE3-201ENST00000315869 C3P01024 1663 aa18.44■□□□□ 0.54
TFE3-201ENST00000315869 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
TFE3-201ENST00000315869 FSD2A1L4K1 749 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 CDC45O75419 566 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 KRT24Q2M2I5 525 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 TTC21BQ7Z4L5 1316 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
TFE3-201ENST00000315869 SETD1AO15047 1707 aaKnown RBP18.42■□□□□ 0.54
TFE3-201ENST00000315869 SMARCA5O60264 1052 aaPredicted RBP18.42■□□□□ 0.54
TFE3-201ENST00000315869 API5Q9BZZ5 524 aaKnown RBP18.42■□□□□ 0.54
TFE3-201ENST00000315869 TPRNQ4KMQ1 711 aa18.42■□□□□ 0.54
TFE3-201ENST00000315869 TBX22Q9Y458 520 aa18.41■□□□□ 0.54
TFE3-201ENST00000315869 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
TFE3-201ENST00000315869 MCTP1Q6DN14 999 aa18.41■□□□□ 0.54
TFE3-201ENST00000315869 GAS2L3Q86XJ1 694 aa18.41■□□□□ 0.54
TFE3-201ENST00000315869 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
TFE3-201ENST00000315869 SNX21Q969T3 373 aa18.4■□□□□ 0.54
TFE3-201ENST00000315869 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
TFE3-201ENST00000315869 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
TFE3-201ENST00000315869 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
TFE3-201ENST00000315869 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
TFE3-201ENST00000315869 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
TFE3-201ENST00000315869 ESPNB1AK53 854 aa18.39■□□□□ 0.54
TFE3-201ENST00000315869 NLRP6P59044 892 aa18.39■□□□□ 0.53
TFE3-201ENST00000315869 ATP7BP35670 1465 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms