RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
CNOT4-201ENST00000315544 TXNDC2Q86VQ3 553 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 NGEFQ8N5V2 710 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 TMF1P82094 1093 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 CRBNQ96SW2 442 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
CNOT4-201ENST00000315544 MRC1P22897 1456 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 AK9Q5TCS8 1911 aa10.51□□□□□ -0.73
CNOT4-201ENST00000315544 A0A1B0GUL6 1792 aa10.5□□□□□ -0.73
CNOT4-201ENST00000315544 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
CNOT4-201ENST00000315544 KIF2CQ99661 725 aa10.5□□□□□ -0.73
CNOT4-201ENST00000315544 PDE4AP27815 886 aa10.49□□□□□ -0.73
CNOT4-201ENST00000315544 CRB1P82279 1406 aa10.49□□□□□ -0.73
CNOT4-201ENST00000315544 LAMA4Q16363 1823 aa10.49□□□□□ -0.73
CNOT4-201ENST00000315544 SEC24BO95487 1268 aa10.49□□□□□ -0.73
CNOT4-201ENST00000315544 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
CNOT4-201ENST00000315544 PRR36Q9H6K5 1346 aa10.47□□□□□ -0.73
CNOT4-201ENST00000315544 MSH6P52701 1360 aa10.47□□□□□ -0.73
CNOT4-201ENST00000315544 USP6P35125 1406 aa10.47□□□□□ -0.73
CNOT4-201ENST00000315544 SPATA31A6Q5VVP1 1343 aa10.47□□□□□ -0.73
CNOT4-201ENST00000315544 KDRP35968 1356 aa10.46□□□□□ -0.73
CNOT4-201ENST00000315544 RARSP54136 660 aaKnown RBP10.46□□□□□ -0.73
CNOT4-201ENST00000315544 TNNQ9UQP3 1299 aa10.46□□□□□ -0.73
CNOT4-201ENST00000315544 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
CNOT4-201ENST00000315544 IBTKQ9P2D0 1353 aaPredicted RBP10.46□□□□□ -0.74
CNOT4-201ENST00000315544 PLIN1O60240 522 aa10.46□□□□□ -0.74
CNOT4-201ENST00000315544 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.74
CNOT4-201ENST00000315544 IL16Q14005 1332 aa10.46□□□□□ -0.74
CNOT4-201ENST00000315544 JCADQ9P266 1359 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 BCL11AQ9H165 835 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 EID1Q9Y6B2 187 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 ECM29Q5VYK3 1845 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 EDC4Q6P2E9 1401 aaKnown RBP10.45□□□□□ -0.74
CNOT4-201ENST00000315544 DOT1LQ8TEK3 1739 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 PCDHB15Q9Y5E8 787 aa10.45□□□□□ -0.74
CNOT4-201ENST00000315544 DLEC1Q9Y238 1755 aa10.44□□□□□ -0.74
CNOT4-201ENST00000315544 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
CNOT4-201ENST00000315544 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
CNOT4-201ENST00000315544 BRINP3Q76B58 766 aa10.44□□□□□ -0.74
CNOT4-201ENST00000315544 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
CNOT4-201ENST00000315544 BCAR3O75815 825 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 NRXN2Q9P2S2 1712 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 BCORQ6W2J9 1755 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 ARFGEF2Q9Y6D5 1785 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 AMOTL2Q9Y2J4 779 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 SALL3Q9BXA9 1300 aa10.43□□□□□ -0.74
CNOT4-201ENST00000315544 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
CNOT4-201ENST00000315544 NOP58Q9Y2X3 529 aaKnown RBP10.42□□□□□ -0.74
CNOT4-201ENST00000315544 BTAF1O14981 1849 aa10.42□□□□□ -0.74
CNOT4-201ENST00000315544 CENPQQ7L2Z9 268 aaPredicted RBP10.42□□□□□ -0.74
CNOT4-201ENST00000315544 FYB1O15117 783 aa10.41□□□□□ -0.74
CNOT4-201ENST00000315544 KIF24Q5T7B8 1368 aa10.41□□□□□ -0.74
CNOT4-201ENST00000315544 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
CNOT4-201ENST00000315544 KIAA0232Q92628 1395 aa10.4□□□□□ -0.74
CNOT4-201ENST00000315544 CLEC17AQ6ZS10 378 aa10.4□□□□□ -0.74
CNOT4-201ENST00000315544 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
CNOT4-201ENST00000315544 TMC1Q8TDI8 760 aa10.4□□□□□ -0.74
CNOT4-201ENST00000315544 ONECUT3O60422 494 aaPredicted RBP10.4□□□□□ -0.75
CNOT4-201ENST00000315544 SIRT2Q8IXJ6 389 aa10.4□□□□□ -0.75
CNOT4-201ENST00000315544 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.75
CNOT4-201ENST00000315544 ABCC4O15439 1325 aa10.39□□□□□ -0.75
CNOT4-201ENST00000315544 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
CNOT4-201ENST00000315544 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
CNOT4-201ENST00000315544 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-201ENST00000315544 COL5A2P05997 1499 aaPredicted RBP10.38□□□□□ -0.75
CNOT4-201ENST00000315544 FSD2A1L4K1 749 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 SLC12A5Q9H2X9 1139 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 SPATA31A3Q5VYP0 1347 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 E9PSI1 815 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
CNOT4-201ENST00000315544 AAMPQ13685 434 aa10.37□□□□□ -0.75
CNOT4-201ENST00000315544 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
CNOT4-201ENST00000315544 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
CNOT4-201ENST00000315544 ZBTB40Q9NUA8 1239 aa10.37□□□□□ -0.75
CNOT4-201ENST00000315544 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
CNOT4-201ENST00000315544 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
CNOT4-201ENST00000315544 HEG1Q9ULI3 1381 aa10.36□□□□□ -0.75
CNOT4-201ENST00000315544 IL13P35225 146 aa10.36□□□□□ -0.75
CNOT4-201ENST00000315544 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 SPEF2Q9C093 1822 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
CNOT4-201ENST00000315544 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 SLAIN2Q9P270 581 aa10.35□□□□□ -0.75
CNOT4-201ENST00000315544 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
CNOT4-201ENST00000315544 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
CNOT4-201ENST00000315544 APAF1O14727 1248 aa10.34□□□□□ -0.75
CNOT4-201ENST00000315544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■□□□ 11.9
CNOT4-201ENST00000315544 ZNF646O15015 1829 aaPredicted RBP10.33□□□□□ -0.76
CNOT4-201ENST00000315544 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
CNOT4-201ENST00000315544 CGNL1Q0VF96 1302 aa10.32□□□□□ -0.76
CNOT4-201ENST00000315544 HSPA1LP34931 641 aa10.31□□□□□ -0.76
CNOT4-201ENST00000315544 RBM25P49756 843 aaKnown RBP10.31□□□□□ -0.76
CNOT4-201ENST00000315544 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms