RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 ZC3H6P61129 1189 aaKnown RBP12.06□□□□□ -0.48
USP15-202ENST00000312635 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
USP15-202ENST00000312635 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
USP15-202ENST00000312635 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
USP15-202ENST00000312635 LTN1O94822 1766 aa12.05□□□□□ -0.48
USP15-202ENST00000312635 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
USP15-202ENST00000312635 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
USP15-202ENST00000312635 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
USP15-202ENST00000312635 FCHSD2O94868 740 aa12.04□□□□□ -0.48
USP15-202ENST00000312635 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
USP15-202ENST00000312635 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP15-202ENST00000312635 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
USP15-202ENST00000312635 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
USP15-202ENST00000312635 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
USP15-202ENST00000312635 NGEFQ8N5V2 710 aa12.03□□□□□ -0.48
USP15-202ENST00000312635 HSPA1LP34931 641 aa12.02□□□□□ -0.48
USP15-202ENST00000312635 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
USP15-202ENST00000312635 COL18A1P39060 1754 aa12.02□□□□□ -0.49
USP15-202ENST00000312635 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
USP15-202ENST00000312635 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
USP15-202ENST00000312635 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
USP15-202ENST00000312635 NEFMP07197 916 aa12.01□□□□□ -0.49
USP15-202ENST00000312635 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
USP15-202ENST00000312635 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
USP15-202ENST00000312635 ERBB3P21860 1342 aa12□□□□□ -0.49
USP15-202ENST00000312635 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
USP15-202ENST00000312635 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
USP15-202ENST00000312635 EYA1Q99502 592 aa12□□□□□ -0.49
USP15-202ENST00000312635 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
USP15-202ENST00000312635 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 KDRP35968 1356 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 FAM208AQ9UK61 1670 aaKnown RBP11.99□□□□□ -0.49
USP15-202ENST00000312635 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
USP15-202ENST00000312635 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
USP15-202ENST00000312635 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP15-202ENST00000312635 SULT6B1Q6IMI4 303 aa11.98□□□□□ -0.49
USP15-202ENST00000312635 FBXO41Q8TF61 875 aa11.98□□□□□ -0.49
USP15-202ENST00000312635 MAPK8IP3Q9UPT6 1336 aa11.98□□□□□ -0.49
USP15-202ENST00000312635 CAMTA1Q9Y6Y1 1673 aa11.98□□□□□ -0.49
USP15-202ENST00000312635 COL5A2P05997 1499 aaPredicted RBP11.97□□□□□ -0.49
USP15-202ENST00000312635 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
USP15-202ENST00000312635 CSB-PGBD3P0DP91 1061 aa11.97□□□□□ -0.49
USP15-202ENST00000312635 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
USP15-202ENST00000312635 NBPF6Q5VWK0 638 aa11.97□□□□□ -0.49
USP15-202ENST00000312635 NBPF4Q96M43 638 aa11.97□□□□□ -0.49
USP15-202ENST00000312635 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
USP15-202ENST00000312635 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
USP15-202ENST00000312635 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
USP15-202ENST00000312635 HMOX1P09601 288 aa11.96□□□□□ -0.49
USP15-202ENST00000312635 EVA1CP58658 441 aa11.96□□□□□ -0.49
USP15-202ENST00000312635 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
USP15-202ENST00000312635 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
USP15-202ENST00000312635 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
USP15-202ENST00000312635 APAF1O14727 1248 aa11.95□□□□□ -0.5
USP15-202ENST00000312635 ADAMTS2O95450 1211 aa11.95□□□□□ -0.5
USP15-202ENST00000312635 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
USP15-202ENST00000312635 NLRP2Q9NX02 1062 aa11.95□□□□□ -0.5
USP15-202ENST00000312635 BTG4Q9NY30 223 aa11.95□□□□□ -0.5
USP15-202ENST00000312635 SLIT2O94813 1529 aa11.94□□□□□ -0.5
USP15-202ENST00000312635 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
USP15-202ENST00000312635 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
USP15-202ENST00000312635 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
USP15-202ENST00000312635 CRB1P82279 1406 aa11.94□□□□□ -0.5
USP15-202ENST00000312635 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
USP15-202ENST00000312635 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
USP15-202ENST00000312635 TOM1L2Q6ZVM7 507 aa11.93□□□□□ -0.5
USP15-202ENST00000312635 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
USP15-202ENST00000312635 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
USP15-202ENST00000312635 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
USP15-202ENST00000312635 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 LRP6O75581 1613 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 FNBP4Q8N3X1 1017 aaPredicted RBP11.92□□□□□ -0.5
USP15-202ENST00000312635 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
USP15-202ENST00000312635 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 PLEKHO1Q53GL0 409 aaPredicted RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 MEX3CQ5U5Q3 659 aaKnown RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 NGLY1Q96IV0 654 aa11.91□□□□□ -0.5
USP15-202ENST00000312635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.51e-8■■■■□ 20.9
USP15-202ENST00000312635 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 UNC5CLQ8IV45 518 aa11.91□□□□□ -0.5
USP15-202ENST00000312635 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
USP15-202ENST00000312635 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
USP15-202ENST00000312635 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
USP15-202ENST00000312635 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
USP15-202ENST00000312635 NRAPQ86VF7 1730 aa11.9□□□□□ -0.5
USP15-202ENST00000312635 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.51
USP15-202ENST00000312635 RIPK4P57078 832 aa11.9□□□□□ -0.51
USP15-202ENST00000312635 C8orf37Q96NL8 207 aa11.9□□□□□ -0.51
USP15-202ENST00000312635 ZNF521Q96K83 1311 aa11.89□□□□□ -0.51
USP15-202ENST00000312635 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
USP15-202ENST00000312635 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
USP15-202ENST00000312635 SPG7Q9UQ90 795 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms