RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
PDE4D-201ENST00000309641 NRAPQ86VF7 1730 aa12.43□□□□□ -0.42
PDE4D-201ENST00000309641 NSD2O96028 1365 aa12.42□□□□□ -0.42
PDE4D-201ENST00000309641 ZNF772Q68DY9 489 aaPredicted RBP12.42□□□□□ -0.42
PDE4D-201ENST00000309641 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
PDE4D-201ENST00000309641 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
PDE4D-201ENST00000309641 NWD2Q9ULI1 1742 aa12.42□□□□□ -0.42
PDE4D-201ENST00000309641 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
PDE4D-201ENST00000309641 LARP1Q6PKG0 1096 aaKnown RBP12.41□□□□□ -0.42
PDE4D-201ENST00000309641 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
PDE4D-201ENST00000309641 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
PDE4D-201ENST00000309641 ATRNO75882 1429 aa12.41□□□□□ -0.42
PDE4D-201ENST00000309641 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
PDE4D-201ENST00000309641 HOXC9P31274 260 aa12.4□□□□□ -0.42
PDE4D-201ENST00000309641 AMPHP49418 695 aa12.4□□□□□ -0.42
PDE4D-201ENST00000309641 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
PDE4D-201ENST00000309641 IP6K1Q92551 441 aa12.4□□□□□ -0.42
PDE4D-201ENST00000309641 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.39□□□□□ -0.43
PDE4D-201ENST00000309641 EVA1CP58658 441 aa12.39□□□□□ -0.43
PDE4D-201ENST00000309641 LTV1Q96GA3 475 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-201ENST00000309641 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
PDE4D-201ENST00000309641 TRPC5Q9UL62 973 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-201ENST00000309641 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
PDE4D-201ENST00000309641 VPS72Q15906 364 aa12.38□□□□□ -0.43
PDE4D-201ENST00000309641 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
PDE4D-201ENST00000309641 GLI3P10071 1580 aa12.38□□□□□ -0.43
PDE4D-201ENST00000309641 ILDR2Q71H61 639 aa12.38□□□□□ -0.43
PDE4D-201ENST00000309641 ERBB3P21860 1342 aa12.38□□□□□ -0.43
PDE4D-201ENST00000309641 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 EP400Q96L91 3159 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 MTHFSP49914 203 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
PDE4D-201ENST00000309641 FLT4P35916 1363 aa12.36□□□□□ -0.43
PDE4D-201ENST00000309641 SPATA31A1Q5TZJ5 1347 aa12.36□□□□□ -0.43
PDE4D-201ENST00000309641 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
PDE4D-201ENST00000309641 RXRBP28702 533 aa12.36□□□□□ -0.43
PDE4D-201ENST00000309641 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
PDE4D-201ENST00000309641 ABCC6O95255 1503 aa12.35□□□□□ -0.43
PDE4D-201ENST00000309641 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
PDE4D-201ENST00000309641 RTL1A6NKG5 1358 aa12.35□□□□□ -0.43
PDE4D-201ENST00000309641 TOM1L2Q6ZVM7 507 aa12.35□□□□□ -0.43
PDE4D-201ENST00000309641 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
PDE4D-201ENST00000309641 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
PDE4D-201ENST00000309641 CRB1P82279 1406 aa12.34□□□□□ -0.43
PDE4D-201ENST00000309641 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
PDE4D-201ENST00000309641 INSRP06213 1382 aa12.34□□□□□ -0.43
PDE4D-201ENST00000309641 PARD3Q8TEW0 1356 aa12.34□□□□□ -0.43
PDE4D-201ENST00000309641 NLRP2Q9NX02 1062 aa12.34□□□□□ -0.43
PDE4D-201ENST00000309641 PPP2R1AP30153 589 aa12.33□□□□□ -0.43
PDE4D-201ENST00000309641 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.43
PDE4D-201ENST00000309641 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.43
PDE4D-201ENST00000309641 NBPF4Q96M43 638 aa12.33□□□□□ -0.43
PDE4D-201ENST00000309641 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
PDE4D-201ENST00000309641 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
PDE4D-201ENST00000309641 RGS12O14924 1447 aa12.33□□□□□ -0.44
PDE4D-201ENST00000309641 TCP11L2Q8N4U5 519 aa12.32□□□□□ -0.44
PDE4D-201ENST00000309641 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
PDE4D-201ENST00000309641 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
PDE4D-201ENST00000309641 A0A0G2JS52 829 aa12.3□□□□□ -0.44
PDE4D-201ENST00000309641 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
PDE4D-201ENST00000309641 MYT1Q01538 1121 aa12.3□□□□□ -0.44
PDE4D-201ENST00000309641 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
PDE4D-201ENST00000309641 EYA1Q99502 592 aa12.3□□□□□ -0.44
PDE4D-201ENST00000309641 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
PDE4D-201ENST00000309641 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
PDE4D-201ENST00000309641 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
PDE4D-201ENST00000309641 IL13P35225 146 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
PDE4D-201ENST00000309641 THSD7AQ9UPZ6 1657 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 RALBP1Q15311 655 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
PDE4D-201ENST00000309641 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
PDE4D-201ENST00000309641 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.44
PDE4D-201ENST00000309641 MEGF6O75095 1541 aa12.26□□□□□ -0.45
PDE4D-201ENST00000309641 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
PDE4D-201ENST00000309641 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
PDE4D-201ENST00000309641 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
PDE4D-201ENST00000309641 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
PDE4D-201ENST00000309641 CCDC184Q52MB2 194 aa12.25□□□□□ -0.45
PDE4D-201ENST00000309641 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
PDE4D-201ENST00000309641 IL2RBP14784 551 aa12.25□□□□□ -0.45
PDE4D-201ENST00000309641 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
PDE4D-201ENST00000309641 HMOX1P09601 288 aa12.24□□□□□ -0.45
PDE4D-201ENST00000309641 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
PDE4D-201ENST00000309641 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
PDE4D-201ENST00000309641 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
PDE4D-201ENST00000309641 DDB1Q16531 1140 aa12.23□□□□□ -0.45
PDE4D-201ENST00000309641 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
PDE4D-201ENST00000309641 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
PDE4D-201ENST00000309641 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
PDE4D-201ENST00000309641 ANP32CO43423 234 aa12.22□□□□□ -0.45
PDE4D-201ENST00000309641 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
PDE4D-201ENST00000309641 EXOC5O00471 708 aa12.21□□□□□ -0.45
PDE4D-201ENST00000309641 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
PDE4D-201ENST00000309641 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms