RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
APTX-201ENST00000309615 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
APTX-201ENST00000309615 HOXC9P31274 260 aa17.49■□□□□ 0.39
APTX-201ENST00000309615 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
APTX-201ENST00000309615 UNC5CLQ8IV45 518 aa17.48■□□□□ 0.39
APTX-201ENST00000309615 RGS17Q9UGC6 210 aaPredicted RBP17.48■□□□□ 0.39
APTX-201ENST00000309615 MAP2P11137 1827 aaKnown RBP17.48■□□□□ 0.39
APTX-201ENST00000309615 ABCC6O95255 1503 aa17.48■□□□□ 0.39
APTX-201ENST00000309615 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 FLT4P35916 1363 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 COL5A2P05997 1499 aaPredicted RBP17.47■□□□□ 0.39
APTX-201ENST00000309615 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
APTX-201ENST00000309615 MTHFSP49914 203 aa17.46■□□□□ 0.39
APTX-201ENST00000309615 EVA1CP58658 441 aa17.46■□□□□ 0.39
APTX-201ENST00000309615 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
APTX-201ENST00000309615 NRAPQ86VF7 1730 aa17.46■□□□□ 0.39
APTX-201ENST00000309615 RGPD5Q99666 1765 aa17.46■□□□□ 0.39
APTX-201ENST00000309615 PPP2R1AP30153 589 aa17.46■□□□□ 0.38
APTX-201ENST00000309615 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.38
APTX-201ENST00000309615 ZNF772Q68DY9 489 aaPredicted RBP17.46■□□□□ 0.38
APTX-201ENST00000309615 RALBP1Q15311 655 aa17.45■□□□□ 0.38
APTX-201ENST00000309615 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
APTX-201ENST00000309615 LARP1Q6PKG0 1096 aaKnown RBP17.44■□□□□ 0.38
APTX-201ENST00000309615 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
APTX-201ENST00000309615 ERBB3P21860 1342 aa17.44■□□□□ 0.38
APTX-201ENST00000309615 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
APTX-201ENST00000309615 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
APTX-201ENST00000309615 INSRP06213 1382 aa17.43■□□□□ 0.38
APTX-201ENST00000309615 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.43■□□□□ 0.38
APTX-201ENST00000309615 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
APTX-201ENST00000309615 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
APTX-201ENST00000309615 VPS72Q15906 364 aa17.42■□□□□ 0.38
APTX-201ENST00000309615 TRPC5Q9UL62 973 aaPredicted RBP17.42■□□□□ 0.38
APTX-201ENST00000309615 ATRNO75882 1429 aa17.42■□□□□ 0.38
APTX-201ENST00000309615 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
APTX-201ENST00000309615 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
APTX-201ENST00000309615 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
APTX-201ENST00000309615 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
APTX-201ENST00000309615 USP35Q9P2H5 1018 aa17.39■□□□□ 0.38
APTX-201ENST00000309615 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
APTX-201ENST00000309615 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
APTX-201ENST00000309615 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
APTX-201ENST00000309615 CRB1P82279 1406 aa17.39■□□□□ 0.37
APTX-201ENST00000309615 ANP32CO43423 234 aa17.39■□□□□ 0.37
APTX-201ENST00000309615 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.37
APTX-201ENST00000309615 GJD4Q96KN9 370 aaPredicted RBP17.38■□□□□ 0.37
APTX-201ENST00000309615 NLRP2Q9NX02 1062 aa17.38■□□□□ 0.37
APTX-201ENST00000309615 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
APTX-201ENST00000309615 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
APTX-201ENST00000309615 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
APTX-201ENST00000309615 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
APTX-201ENST00000309615 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
APTX-201ENST00000309615 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
APTX-201ENST00000309615 GLI3P10071 1580 aa17.36■□□□□ 0.37
APTX-201ENST00000309615 IL13P35225 146 aa17.35■□□□□ 0.37
APTX-201ENST00000309615 RXRBP28702 533 aa17.35■□□□□ 0.37
APTX-201ENST00000309615 RBM6P78332 1123 aaKnown RBP17.35■□□□□ 0.37
APTX-201ENST00000309615 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
APTX-201ENST00000309615 CFAP53Q96M91 514 aa17.35■□□□□ 0.37
APTX-201ENST00000309615 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
APTX-201ENST00000309615 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
APTX-201ENST00000309615 EYA1Q99502 592 aa17.34■□□□□ 0.37
APTX-201ENST00000309615 RGPD2P0DJD1 1756 aa17.34■□□□□ 0.37
APTX-201ENST00000309615 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.37
APTX-201ENST00000309615 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.37
APTX-201ENST00000309615 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
APTX-201ENST00000309615 BARGINQ6ZT62 677 aa17.31■□□□□ 0.36
APTX-201ENST00000309615 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
APTX-201ENST00000309615 NCAPD2Q15021 1401 aa17.29■□□□□ 0.36
APTX-201ENST00000309615 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
APTX-201ENST00000309615 ONECUT3O60422 494 aaPredicted RBP17.29■□□□□ 0.36
APTX-201ENST00000309615 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
APTX-201ENST00000309615 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
APTX-201ENST00000309615 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
APTX-201ENST00000309615 DISP2A7MBM2 1401 aa17.27■□□□□ 0.36
APTX-201ENST00000309615 A0A0G2JS52 829 aa17.27■□□□□ 0.36
APTX-201ENST00000309615 MYT1Q01538 1121 aa17.27■□□□□ 0.36
APTX-201ENST00000309615 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
APTX-201ENST00000309615 IL2RBP14784 551 aa17.27■□□□□ 0.35
APTX-201ENST00000309615 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.35
APTX-201ENST00000309615 NUDCQ9Y266 331 aa17.27■□□□□ 0.35
APTX-201ENST00000309615 RGS12O14924 1447 aa17.26■□□□□ 0.35
APTX-201ENST00000309615 MEGF6O75095 1541 aa17.26■□□□□ 0.35
APTX-201ENST00000309615 HMOX1P09601 288 aa17.26■□□□□ 0.35
APTX-201ENST00000309615 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
APTX-201ENST00000309615 KDRP35968 1356 aa17.25■□□□□ 0.35
APTX-201ENST00000309615 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
APTX-201ENST00000309615 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
APTX-201ENST00000309615 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.352e-8■■■■■ 37
APTX-201ENST00000309615 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
APTX-201ENST00000309615 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
APTX-201ENST00000309615 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
APTX-201ENST00000309615 MIER1Q8N108 512 aa17.22■□□□□ 0.35
APTX-201ENST00000309615 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
APTX-201ENST00000309615 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
APTX-201ENST00000309615 DDB1Q16531 1140 aa17.22■□□□□ 0.35
APTX-201ENST00000309615 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms