RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SPATA31A7Q8IWB4 1347 aa27.2■■□□□ 1.94
VEGFB-201ENST00000309422 KIF20BQ96Q89 1820 aa27.19■■□□□ 1.94
VEGFB-201ENST00000309422 CAMTA1Q9Y6Y1 1673 aa27.19■■□□□ 1.94
VEGFB-201ENST00000309422 CARD14Q9BXL6 1004 aa27.19■■□□□ 1.94
VEGFB-201ENST00000309422 GLI3P10071 1580 aa27.18■■□□□ 1.94
VEGFB-201ENST00000309422 C11orf95C9JLR9 678 aaPredicted RBP27.18■■□□□ 1.94
VEGFB-201ENST00000309422 TOM1L2Q6ZVM7 507 aa27.18■■□□□ 1.94
VEGFB-201ENST00000309422 USP35Q9P2H5 1018 aa27.18■■□□□ 1.94
VEGFB-201ENST00000309422 CCDC7Q96M83 1385 aa27.17■■□□□ 1.94
VEGFB-201ENST00000309422 AMPHP49418 695 aa27.17■■□□□ 1.94
VEGFB-201ENST00000309422 FAM98CQ17RN3 349 aaKnown RBP27.17■■□□□ 1.94
VEGFB-201ENST00000309422 CRB1P82279 1406 aa27.16■■□□□ 1.94
VEGFB-201ENST00000309422 NSD2O96028 1365 aa27.16■■□□□ 1.94
VEGFB-201ENST00000309422 SPATA31A1Q5TZJ5 1347 aa27.16■■□□□ 1.94
VEGFB-201ENST00000309422 LARP1Q6PKG0 1096 aaKnown RBP27.15■■□□□ 1.94
VEGFB-201ENST00000309422 WDR17Q8IZU2 1322 aa27.14■■□□□ 1.94
VEGFB-201ENST00000309422 SEPT12Q8IYM1 358 aa27.14■■□□□ 1.94
VEGFB-201ENST00000309422 TCP11L2Q8N4U5 519 aa27.14■■□□□ 1.94
VEGFB-201ENST00000309422 THRAP3Q9Y2W1 955 aaKnown RBP27.14■■□□□ 1.94
VEGFB-201ENST00000309422 BLMP54132 1417 aaPredicted RBP27.14■■□□□ 1.93
VEGFB-201ENST00000309422 RTL1A6NKG5 1358 aa27.13■■□□□ 1.93
VEGFB-201ENST00000309422 SMG6Q86US8 1419 aaKnown RBP27.11■■□□□ 1.93
VEGFB-201ENST00000309422 MAP3K19Q56UN5 1328 aa27.1■■□□□ 1.93
VEGFB-201ENST00000309422 WASHC2AQ641Q2 1341 aa27.1■■□□□ 1.93
VEGFB-201ENST00000309422 LTN1O94822 1766 aa27.1■■□□□ 1.93
VEGFB-201ENST00000309422 AXIN2Q9Y2T1 843 aa27.09■■□□□ 1.93
VEGFB-201ENST00000309422 BARGINQ6ZT62 677 aa27.09■■□□□ 1.93
VEGFB-201ENST00000309422 IP6K1Q92551 441 aa27.09■■□□□ 1.93
VEGFB-201ENST00000309422 ERBB3P21860 1342 aa27.08■■□□□ 1.93
VEGFB-201ENST00000309422 KIF24Q5T7B8 1368 aa27.07■■□□□ 1.92
VEGFB-201ENST00000309422 ONECUT3O60422 494 aaPredicted RBP27.07■■□□□ 1.92
VEGFB-201ENST00000309422 RRS1Q15050 365 aaKnown RBP27.07■■□□□ 1.92
VEGFB-201ENST00000309422 ANKRD24Q8TF21 1146 aa27.07■■□□□ 1.92
VEGFB-201ENST00000309422 KRT27Q7Z3Y8 459 aa27.06■■□□□ 1.92
VEGFB-201ENST00000309422 CDCA7Q9BWT1 371 aaPredicted RBP27.06■■□□□ 1.92
VEGFB-201ENST00000309422 NLRP2Q9NX02 1062 aa27.06■■□□□ 1.92
VEGFB-201ENST00000309422 COL18A1P39060 1754 aa27.06■■□□□ 1.92
VEGFB-201ENST00000309422 FLT4P35916 1363 aa27.05■■□□□ 1.92
VEGFB-201ENST00000309422 HOXC9P31274 260 aa27.05■■□□□ 1.92
VEGFB-201ENST00000309422 MORC1Q86VD1 984 aa27.05■■□□□ 1.92
VEGFB-201ENST00000309422 PPM1GO15355 546 aaPredicted RBP27.04■■□□□ 1.92
VEGFB-201ENST00000309422 LTV1Q96GA3 475 aaPredicted RBP27.04■■□□□ 1.92
VEGFB-201ENST00000309422 CARD10Q9BWT7 1032 aa27.04■■□□□ 1.92
VEGFB-201ENST00000309422 PDE3BQ13370 1112 aa27.03■■□□□ 1.92
VEGFB-201ENST00000309422 TNNT2P45379 298 aaPredicted RBP27.02■■□□□ 1.92
VEGFB-201ENST00000309422 ANKRD26Q9UPS8 1709 aa27■■□□□ 1.91
VEGFB-201ENST00000309422 THSD7AQ9UPZ6 1657 aa26.99■■□□□ 1.91
VEGFB-201ENST00000309422 FBLN1P23142 703 aa26.98■■□□□ 1.91
VEGFB-201ENST00000309422 FAM208AQ9UK61 1670 aaKnown RBP26.97■■□□□ 1.91
VEGFB-201ENST00000309422 SF3B2Q13435 895 aaKnown RBP26.97■■□□□ 1.91
VEGFB-201ENST00000309422 DDB1Q16531 1140 aa26.97■■□□□ 1.91
VEGFB-201ENST00000309422 INSRP06213 1382 aa26.96■■□□□ 1.91
VEGFB-201ENST00000309422 EMILIN1Q9Y6C2 1016 aa26.96■■□□□ 1.91
VEGFB-201ENST00000309422 AMER1Q5JTC6 1135 aaPredicted RBP26.94■■□□□ 1.9
VEGFB-201ENST00000309422 UPF1Q92900 1129 aaKnown RBP eCLIP26.94■■□□□ 1.9
VEGFB-201ENST00000309422 RGPD5Q99666 1765 aa26.94■■□□□ 1.9
VEGFB-201ENST00000309422 CC2D1BQ5T0F9 858 aaKnown RBP26.93■■□□□ 1.9
VEGFB-201ENST00000309422 IL2RBP14784 551 aa26.92■■□□□ 1.9
VEGFB-201ENST00000309422 CCDC125Q86Z20 511 aa26.92■■□□□ 1.9
VEGFB-201ENST00000309422 HSP90AB2PQ58FF8 381 aa26.91■■□□□ 1.9
VEGFB-201ENST00000309422 NPC1L1Q9UHC9 1359 aa26.9■■□□□ 1.9
VEGFB-201ENST00000309422 PARP4Q9UKK3 1724 aaKnown RBP26.89■■□□□ 1.9
VEGFB-201ENST00000309422 EXOC5O00471 708 aa26.89■■□□□ 1.9
VEGFB-201ENST00000309422 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
VEGFB-201ENST00000309422 FAM196AQ6ZSG2 479 aa26.89■■□□□ 1.9
VEGFB-201ENST00000309422 POLKQ9UBT6 870 aa26.89■■□□□ 1.9
VEGFB-201ENST00000309422 PER1O15534 1290 aaPredicted RBP26.88■■□□□ 1.89
VEGFB-201ENST00000309422 BRWD3Q6RI45 1802 aa26.88■■□□□ 1.89
VEGFB-201ENST00000309422 OVOS2A0A0G2JMS6 1433 aa26.86■■□□□ 1.89
VEGFB-201ENST00000309422 RAPGEF4Q8WZA2 1011 aa26.86■■□□□ 1.89
VEGFB-201ENST00000309422 DISP2A7MBM2 1401 aa26.86■■□□□ 1.89
VEGFB-201ENST00000309422 TNS2Q63HR2 1409 aa26.86■■□□□ 1.89
VEGFB-201ENST00000309422 LRRC37A3O60309 1634 aa26.85■■□□□ 1.89
VEGFB-201ENST00000309422 PEAK1Q9H792 1746 aa26.85■■□□□ 1.89
VEGFB-201ENST00000309422 WNK3Q9BYP7 1800 aa26.85■■□□□ 1.89
VEGFB-201ENST00000309422 FAM182BQ5T319 152 aa26.82■■□□□ 1.88
VEGFB-201ENST00000309422 TATP17735 454 aaPredicted RBP26.81■■□□□ 1.88
VEGFB-201ENST00000309422 NBPF6Q5VWK0 638 aa26.8■■□□□ 1.88
VEGFB-201ENST00000309422 NBPF4Q96M43 638 aa26.8■■□□□ 1.88
VEGFB-201ENST00000309422 BAG6P46379 1132 aa26.79■■□□□ 1.88
VEGFB-201ENST00000309422 USHBP1Q8N6Y0 703 aa26.79■■□□□ 1.88
VEGFB-201ENST00000309422 MAP2P11137 1827 aaKnown RBP26.78■■□□□ 1.88
VEGFB-201ENST00000309422 EIF4A2Q14240 407 aaKnown RBP26.76■■□□□ 1.87
VEGFB-201ENST00000309422 CFAP53Q96M91 514 aa26.75■■□□□ 1.87
VEGFB-201ENST00000309422 MTHFSP49914 203 aa26.74■■□□□ 1.87
VEGFB-201ENST00000309422 RGPD1P0DJD0 1748 aa26.74■■□□□ 1.87
VEGFB-201ENST00000309422 EP400Q96L91 3159 aa26.74■■□□□ 1.87
VEGFB-201ENST00000309422 TRIM37O94972 964 aa26.73■■□□□ 1.87
VEGFB-201ENST00000309422 ZCRB1Q8TBF4 217 aaKnown RBP26.73■■□□□ 1.87
VEGFB-201ENST00000309422 DDX10Q13206 875 aaKnown RBP26.72■■□□□ 1.87
VEGFB-201ENST00000309422 DDX54Q8TDD1 881 aaKnown RBP26.72■■□□□ 1.87
VEGFB-201ENST00000309422 MEGF6O75095 1541 aa26.72■■□□□ 1.87
VEGFB-201ENST00000309422 MARCH10Q8NA82 808 aaPredicted RBP26.71■■□□□ 1.87
VEGFB-201ENST00000309422 EYA1Q99502 592 aa26.71■■□□□ 1.87
VEGFB-201ENST00000309422 PCDH11XQ9BZA7 1347 aa26.71■■□□□ 1.87
VEGFB-201ENST00000309422 PCDH11YQ9BZA8 1340 aa26.71■■□□□ 1.87
VEGFB-201ENST00000309422 SPG7Q9UQ90 795 aa26.7■■□□□ 1.86
VEGFB-201ENST00000309422 BCL9O00512 1426 aa26.69■■□□□ 1.86
VEGFB-201ENST00000309422 DIAPH1O60610 1272 aaKnown RBP26.69■■□□□ 1.86
VEGFB-201ENST00000309422 IGSF1Q8N6C5 1336 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms