RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
TMOD3-201ENST00000308580 HOOK1Q9UJC3 728 aaKnown RBP11.89□□□□□ -0.51
TMOD3-201ENST00000308580 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
TMOD3-201ENST00000308580 PDCP20941 246 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 TOM1L2Q6ZVM7 507 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 KIF14Q15058 1648 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 HOMER1Q86YM7 354 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
TMOD3-201ENST00000308580 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
TMOD3-201ENST00000308580 TPM2P07951 284 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 FAM13BQ9NYF5 915 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 PCMTD1Q96MG8 357 aaPredicted RBP11.87□□□□□ -0.51
TMOD3-201ENST00000308580 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 CCDC47Q96A33 483 aaKnown RBP11.87□□□□□ -0.51
TMOD3-201ENST00000308580 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
TMOD3-201ENST00000308580 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.86□□□□□ -0.51
TMOD3-201ENST00000308580 AACSQ86V21 672 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
TMOD3-201ENST00000308580 CEP89Q96ST8 783 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 MEX3CQ5U5Q3 659 aaKnown RBP11.86□□□□□ -0.51
TMOD3-201ENST00000308580 CNNM1Q9NRU3 951 aa11.86□□□□□ -0.51
TMOD3-201ENST00000308580 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
TMOD3-201ENST00000308580 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 A0A0U1RQG5 324 aaPredicted RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 CWC22Q9HCG8 908 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 NOS1P29475 1434 aa11.85□□□□□ -0.51
TMOD3-201ENST00000308580 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
TMOD3-201ENST00000308580 SCAF11Q99590 1463 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
TMOD3-201ENST00000308580 ABCC11Q96J66 1382 aa11.85□□□□□ -0.51
TMOD3-201ENST00000308580 STK3Q13188 491 aa11.85□□□□□ -0.51
TMOD3-201ENST00000308580 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
TMOD3-201ENST00000308580 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
TMOD3-201ENST00000308580 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
TMOD3-201ENST00000308580 WASLO00401 505 aaPredicted RBP11.84□□□□□ -0.51
TMOD3-201ENST00000308580 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
TMOD3-201ENST00000308580 RRP12Q5JTH9 1297 aaKnown RBP11.84□□□□□ -0.51
TMOD3-201ENST00000308580 CWC27Q6UX04 472 aaKnown RBP11.84□□□□□ -0.51
TMOD3-201ENST00000308580 KINO60870 393 aaKnown RBP11.84□□□□□ -0.51
TMOD3-201ENST00000308580 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
TMOD3-201ENST00000308580 MCM4P33991 863 aa11.84□□□□□ -0.51
TMOD3-201ENST00000308580 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
TMOD3-201ENST00000308580 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.51
TMOD3-201ENST00000308580 TRIM5Q9C035 493 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 SMARCA5O60264 1052 aaPredicted RBP11.83□□□□□ -0.52
TMOD3-201ENST00000308580 TRIM27P14373 513 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 TSPY26PQ9H489 355 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 CCDC39Q9UFE4 941 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
TMOD3-201ENST00000308580 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
TMOD3-201ENST00000308580 F6X3S4 739 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 FMNL2Q96PY5 1086 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 NAT10Q9H0A0 1025 aaKnown RBP11.82□□□□□ -0.52
TMOD3-201ENST00000308580 XBP1P17861 261 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 R3HCC1Q9Y3T6 440 aaKnown RBP11.82□□□□□ -0.52
TMOD3-201ENST00000308580 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
TMOD3-201ENST00000308580 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
TMOD3-201ENST00000308580 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
TMOD3-201ENST00000308580 STK38Q15208 465 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 JAKMIP1Q96N16 626 aaKnown RBP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 OLFM4Q6UX06 510 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 FKBP4Q02790 459 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMOD3-201ENST00000308580 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 FANCAO15360 1455 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 MX1P20591 662 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
TMOD3-201ENST00000308580 TCEAL9Q9UHQ7 104 aa11.8□□□□□ -0.52
TMOD3-201ENST00000308580 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 UPF3BQ9BZI7 483 aaKnown RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
TMOD3-201ENST00000308580 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
TMOD3-201ENST00000308580 FBLN1P23142 703 aa11.8□□□□□ -0.52
TMOD3-201ENST00000308580 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms