RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 GDPD2Q9HCC8 539 aa15□□□□□ -0.01
USP38-201ENST00000307017 CCDC97Q96F63 343 aaPredicted RBP15□□□□□ -0.01
USP38-201ENST00000307017 FILIP1LQ4L180 1135 aa15□□□□□ -0.01
USP38-201ENST00000307017 GOPCQ9HD26 462 aa15□□□□□ -0.01
USP38-201ENST00000307017 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 GOLGA6L10A0A0M3HER8 536 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 GOLGA6L10A6NI86 522 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 LRRFIP1Q32MZ4 808 aaKnown RBP14.99□□□□□ -0.01
USP38-201ENST00000307017 KLHL10Q6JEL2 608 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 PPFIBP1Q86W92 1011 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 USP5P45974 858 aa14.99□□□□□ -0.01
USP38-201ENST00000307017 PRKAR2BP31323 418 aa14.98□□□□□ -0.01
USP38-201ENST00000307017 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
USP38-201ENST00000307017 CPLX3Q8WVH0 158 aa14.98□□□□□ -0.01
USP38-201ENST00000307017 ZNF830Q96NB3 372 aaPredicted RBP14.98□□□□□ -0.01
USP38-201ENST00000307017 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
USP38-201ENST00000307017 PSMA5P28066 241 aa14.98□□□□□ -0.01
USP38-201ENST00000307017 RBM27Q9P2N5 1060 aaKnown RBP14.98□□□□□ -0.01
USP38-201ENST00000307017 PPARDQ03181 441 aa14.98□□□□□ -0.01
USP38-201ENST00000307017 CGNQ9P2M7 1197 aaKnown RBP14.98□□□□□ -0.01
USP38-201ENST00000307017 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
USP38-201ENST00000307017 LARP1BQ659C4 914 aaKnown RBP14.97□□□□□ -0.01
USP38-201ENST00000307017 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
USP38-201ENST00000307017 RAI14Q9P0K7 980 aa14.96□□□□□ -0.01
USP38-201ENST00000307017 ERCC4Q92889 916 aaPredicted RBP14.96□□□□□ -0.01
USP38-201ENST00000307017 LRRCC1Q9C099 1032 aa14.96□□□□□ -0.01
USP38-201ENST00000307017 CCDC69A6NI79 296 aa14.96□□□□□ -0.02
USP38-201ENST00000307017 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.02
USP38-201ENST00000307017 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.02
USP38-201ENST00000307017 K7ELQ4 463 aaPredicted RBP14.96□□□□□ -0.02
USP38-201ENST00000307017 ATP2C2O75185 946 aa14.96□□□□□ -0.02
USP38-201ENST00000307017 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.02
USP38-201ENST00000307017 CCDC144CPQ8IYA2 1237 aa14.96□□□□□ -0.02
USP38-201ENST00000307017 XBP1P17861 261 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 KIAA1328Q86T90 577 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 SPATA32Q96LK8 384 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
USP38-201ENST00000307017 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 CLASRPQ8N2M8 674 aaKnown RBP14.95□□□□□ -0.02
USP38-201ENST00000307017 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
USP38-201ENST00000307017 ROCK1Q13464 1354 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 CCDC192P0DO97 292 aa14.95□□□□□ -0.02
USP38-201ENST00000307017 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
USP38-201ENST00000307017 THUMPD2Q9BTF0 503 aaKnown RBP14.95□□□□□ -0.02
USP38-201ENST00000307017 GNAI1P63096 354 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 HSP90AA4PQ58FG1 418 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 AACSQ86V21 672 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 PDCL2Q8N4E4 241 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 ABTB2Q8N961 1025 aa14.94□□□□□ -0.02
USP38-201ENST00000307017 LIG1P18858 919 aa14.93□□□□□ -0.02
USP38-201ENST00000307017 TSHZ3Q63HK5 1081 aa14.93□□□□□ -0.02
USP38-201ENST00000307017 RNF187Q5TA31 235 aaPredicted RBP14.93□□□□□ -0.02
USP38-201ENST00000307017 NLRP6P59044 892 aa14.93□□□□□ -0.02
USP38-201ENST00000307017 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
USP38-201ENST00000307017 CYP46A1Q9Y6A2 500 aa14.93□□□□□ -0.02
USP38-201ENST00000307017 IGSF3O75054 1194 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 C16orf45Q96MC5 204 aaPredicted RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 PDRG1Q9NUG6 133 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 NBPF1Q3BBV0 1214 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 ZNF396Q96N95 335 aaPredicted RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 CFAP45Q9UL16 551 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 BIN1O00499 593 aa14.92□□□□□ -0.02
USP38-201ENST00000307017 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP38-201ENST00000307017 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
USP38-201ENST00000307017 ESCO1Q5FWF5 840 aa14.91□□□□□ -0.02
USP38-201ENST00000307017 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
USP38-201ENST00000307017 KIF6Q6ZMV9 814 aa14.91□□□□□ -0.02
USP38-201ENST00000307017 LETM1O95202 739 aaPredicted RBP14.91□□□□□ -0.02
USP38-201ENST00000307017 CYB5RLQ6IPT4 315 aa14.91□□□□□ -0.02
USP38-201ENST00000307017 UBA5Q9GZZ9 404 aa14.91□□□□□ -0.02
USP38-201ENST00000307017 FAM107BQ9H098 131 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 UPF3BQ9BZI7 483 aaKnown RBP14.9□□□□□ -0.02
USP38-201ENST00000307017 CNTLNQ9NXG0 1405 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 EXOC6BQ9Y2D4 811 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 TXLNAP40222 546 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 SART3Q15020 963 aaKnown RBP14.9□□□□□ -0.02
USP38-201ENST00000307017 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 GNAI2P04899 355 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 PPP4R3BQ5MIZ7 849 aa14.9□□□□□ -0.02
USP38-201ENST00000307017 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
USP38-201ENST00000307017 MYO6Q9UM54 1294 aa14.89□□□□□ -0.03
USP38-201ENST00000307017 CASQ1P31415 396 aa14.89□□□□□ -0.03
USP38-201ENST00000307017 SULT6B1Q6IMI4 303 aa14.89□□□□□ -0.03
USP38-201ENST00000307017 ZSCAN29Q8IWY8 852 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms