RNA–Protein interactions for RNA: ENST00000304786.11

SRP9-201, Transcript of signal recognition particle 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP9, Length 1,480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-201ENST00000304786 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
SRP9-201ENST00000304786 SEPT12Q8IYM1 358 aa18.69■□□□□ 0.58
SRP9-201ENST00000304786 COG3Q96JB2 828 aa18.69■□□□□ 0.58
SRP9-201ENST00000304786 PANK3Q9H999 370 aa18.69■□□□□ 0.58
SRP9-201ENST00000304786 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
SRP9-201ENST00000304786 COL5A2P05997 1499 aaPredicted RBP18.69■□□□□ 0.58
SRP9-201ENST00000304786 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
SRP9-201ENST00000304786 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
SRP9-201ENST00000304786 BRWD3Q6RI45 1802 aa18.68■□□□□ 0.58
SRP9-201ENST00000304786 KIF20BQ96Q89 1820 aa18.67■□□□□ 0.58
SRP9-201ENST00000304786 LTN1O94822 1766 aa18.67■□□□□ 0.58
SRP9-201ENST00000304786 A0A0G2JS52 829 aa18.64■□□□□ 0.57
SRP9-201ENST00000304786 MYT1Q01538 1121 aa18.64■□□□□ 0.57
SRP9-201ENST00000304786 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
SRP9-201ENST00000304786 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.575e-9■■■□□ 19.1
SRP9-201ENST00000304786 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
SRP9-201ENST00000304786 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
SRP9-201ENST00000304786 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
SRP9-201ENST00000304786 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
SRP9-201ENST00000304786 TOM1L2Q6ZVM7 507 aa18.61■□□□□ 0.57
SRP9-201ENST00000304786 CRB1P82279 1406 aa18.61■□□□□ 0.57
SRP9-201ENST00000304786 THSD7AQ9UPZ6 1657 aa18.61■□□□□ 0.57
SRP9-201ENST00000304786 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
SRP9-201ENST00000304786 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
SRP9-201ENST00000304786 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
SRP9-201ENST00000304786 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
SRP9-201ENST00000304786 IP6K1Q92551 441 aa18.59■□□□□ 0.57
SRP9-201ENST00000304786 BARGINQ6ZT62 677 aa18.58■□□□□ 0.57
SRP9-201ENST00000304786 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.57
SRP9-201ENST00000304786 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.57
SRP9-201ENST00000304786 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.57
SRP9-201ENST00000304786 HOXC9P31274 260 aa18.58■□□□□ 0.56
SRP9-201ENST00000304786 EP400Q96L91 3159 aa18.57■□□□□ 0.56
SRP9-201ENST00000304786 ABCC6O95255 1503 aa18.57■□□□□ 0.56
SRP9-201ENST00000304786 AMPHP49418 695 aa18.57■□□□□ 0.56
SRP9-201ENST00000304786 PEAK1Q9H792 1746 aa18.57■□□□□ 0.56
SRP9-201ENST00000304786 ERBB3P21860 1342 aa18.57■□□□□ 0.56
SRP9-201ENST00000304786 TNNT2P45379 298 aaPredicted RBP18.56■□□□□ 0.56
SRP9-201ENST00000304786 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
SRP9-201ENST00000304786 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
SRP9-201ENST00000304786 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
SRP9-201ENST00000304786 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
SRP9-201ENST00000304786 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
SRP9-201ENST00000304786 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
SRP9-201ENST00000304786 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
SRP9-201ENST00000304786 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
SRP9-201ENST00000304786 RGPD2P0DJD1 1756 aa18.53■□□□□ 0.56
SRP9-201ENST00000304786 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
SRP9-201ENST00000304786 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
SRP9-201ENST00000304786 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.55
SRP9-201ENST00000304786 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.55
SRP9-201ENST00000304786 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
SRP9-201ENST00000304786 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
SRP9-201ENST00000304786 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
SRP9-201ENST00000304786 DISP2A7MBM2 1401 aa18.5■□□□□ 0.55
SRP9-201ENST00000304786 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
SRP9-201ENST00000304786 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SRP9-201ENST00000304786 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
SRP9-201ENST00000304786 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
SRP9-201ENST00000304786 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
SRP9-201ENST00000304786 FLT4P35916 1363 aa18.48■□□□□ 0.55
SRP9-201ENST00000304786 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
SRP9-201ENST00000304786 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
SRP9-201ENST00000304786 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
SRP9-201ENST00000304786 NSD2O96028 1365 aa18.47■□□□□ 0.55
SRP9-201ENST00000304786 INSRP06213 1382 aa18.47■□□□□ 0.55
SRP9-201ENST00000304786 DDB1Q16531 1140 aa18.46■□□□□ 0.55
SRP9-201ENST00000304786 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
SRP9-201ENST00000304786 FAM208AQ9UK61 1670 aaKnown RBP18.45■□□□□ 0.54
SRP9-201ENST00000304786 MARCH10Q8NA82 808 aaPredicted RBP18.45■□□□□ 0.54
SRP9-201ENST00000304786 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
SRP9-201ENST00000304786 KIF24Q5T7B8 1368 aa18.44■□□□□ 0.54
SRP9-201ENST00000304786 IL2RBP14784 551 aa18.43■□□□□ 0.54
SRP9-201ENST00000304786 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
SRP9-201ENST00000304786 EXOC5O00471 708 aa18.42■□□□□ 0.54
SRP9-201ENST00000304786 TRIM37O94972 964 aa18.42■□□□□ 0.54
SRP9-201ENST00000304786 FAM196AQ6ZSG2 479 aa18.42■□□□□ 0.54
SRP9-201ENST00000304786 CCDC125Q86Z20 511 aa18.4■□□□□ 0.54
SRP9-201ENST00000304786 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
SRP9-201ENST00000304786 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.54
SRP9-201ENST00000304786 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.54
SRP9-201ENST00000304786 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.54
SRP9-201ENST00000304786 EYA1Q99502 592 aa18.39■□□□□ 0.54
SRP9-201ENST00000304786 MEGF6O75095 1541 aa18.39■□□□□ 0.53
SRP9-201ENST00000304786 TNS2Q63HR2 1409 aa18.38■□□□□ 0.53
SRP9-201ENST00000304786 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SRP9-201ENST00000304786 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
SRP9-201ENST00000304786 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
SRP9-201ENST00000304786 SBF2Q86WG5 1849 aa18.36■□□□□ 0.53
SRP9-201ENST00000304786 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
SRP9-201ENST00000304786 MTHFSP49914 203 aa18.36■□□□□ 0.53
SRP9-201ENST00000304786 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
SRP9-201ENST00000304786 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
SRP9-201ENST00000304786 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
SRP9-201ENST00000304786 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
SRP9-201ENST00000304786 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
SRP9-201ENST00000304786 KCNQ2O43526 872 aa18.33■□□□□ 0.52
SRP9-201ENST00000304786 APBA3O96018 575 aa18.33■□□□□ 0.52
SRP9-201ENST00000304786 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
SRP9-201ENST00000304786 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms