RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 SOX12O15370 315 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 MYZAPP0CAP1 466 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 CASQ1P31415 396 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 RIPK4P57078 832 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 SMC1AQ14683 1233 aaKnown RBP12.82□□□□□ -0.36
MECP2-201ENST00000303391 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
MECP2-201ENST00000303391 TEFQ10587 303 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
MECP2-201ENST00000303391 CDK5RAP3Q96JB5 506 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 G3V3G9 751 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
MECP2-201ENST00000303391 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
MECP2-201ENST00000303391 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
MECP2-201ENST00000303391 SETSIPP0DME0 302 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
MECP2-201ENST00000303391 ME1P48163 572 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 TAF4BQ92750 862 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 DDX12PQ92771 950 aa12.81□□□□□ -0.36
MECP2-201ENST00000303391 V9GYY5 206 aaPredicted RBP12.81□□□□□ -0.36
MECP2-201ENST00000303391 TUBBP07437 444 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 PPM1EQ8WY54 764 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 TRIM22Q8IYM9 498 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 AKNAQ7Z591 1439 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 STAMBPO95630 424 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 SENP3Q9H4L4 574 aaPredicted RBP12.8□□□□□ -0.36
MECP2-201ENST00000303391 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 CCDC175P0C221 793 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
MECP2-201ENST00000303391 NAA15Q9BXJ9 866 aaKnown RBP12.8□□□□□ -0.36
MECP2-201ENST00000303391 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
MECP2-201ENST00000303391 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
MECP2-201ENST00000303391 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
MECP2-201ENST00000303391 DESP17661 470 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
MECP2-201ENST00000303391 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 WASF1Q92558 559 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 CEP131Q9UPN4 1083 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 SH2B1Q9NRF2 756 aaPredicted RBP12.79□□□□□ -0.36
MECP2-201ENST00000303391 MNAT1P51948 309 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 TTC5Q8N0Z6 440 aa12.79□□□□□ -0.36
MECP2-201ENST00000303391 KIF20AO95235 890 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 ZFYVE27Q5T4F4 411 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 CCT4P50991 539 aaKnown RBP12.78□□□□□ -0.36
MECP2-201ENST00000303391 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
MECP2-201ENST00000303391 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
MECP2-201ENST00000303391 CBX1P83916 185 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
MECP2-201ENST00000303391 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 CETN2P41208 172 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
MECP2-201ENST00000303391 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.36
MECP2-201ENST00000303391 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.36
MECP2-201ENST00000303391 EID1Q9Y6B2 187 aa12.77□□□□□ -0.36
MECP2-201ENST00000303391 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.37
MECP2-201ENST00000303391 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
MECP2-201ENST00000303391 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
MECP2-201ENST00000303391 FGFR1OPO95684 399 aaKnown RBP12.77□□□□□ -0.37
MECP2-201ENST00000303391 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
MECP2-201ENST00000303391 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
MECP2-201ENST00000303391 HSPA4P34932 840 aa12.77□□□□□ -0.37
MECP2-201ENST00000303391 TAX1BP1Q86VP1 789 aa12.77□□□□□ -0.37
MECP2-201ENST00000303391 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
MECP2-201ENST00000303391 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
MECP2-201ENST00000303391 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
MECP2-201ENST00000303391 GNAI2P04899 355 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 SPA17Q15506 151 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 SYCE3A1L190 88 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 FAM193AP78312 1265 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
MECP2-201ENST00000303391 ANKS4BQ8N8V4 417 aa12.76□□□□□ -0.37
MECP2-201ENST00000303391 A6NNZ2 444 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
MECP2-201ENST00000303391 TUBB8Q3ZCM7 444 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 RBM28Q9NW13 759 aaKnown RBP12.75□□□□□ -0.37
MECP2-201ENST00000303391 HECW1Q76N89 1606 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
MECP2-201ENST00000303391 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
MECP2-201ENST00000303391 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
MECP2-201ENST00000303391 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 NKTRP30414 1462 aaKnown RBP12.75□□□□□ -0.37
MECP2-201ENST00000303391 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
MECP2-201ENST00000303391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.375e-7■■■■□ 20.4
MECP2-201ENST00000303391 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms