RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LMTK3Q96Q04 1460 aa29.01■■■□□ 2.23
SMAD1-201ENST00000302085 IL16Q14005 1332 aa29■■■□□ 2.23
SMAD1-201ENST00000302085 TMEM94Q12767 1356 aa29■■■□□ 2.23
SMAD1-201ENST00000302085 CCDC136Q96JN2 1154 aa28.99■■■□□ 2.23
SMAD1-201ENST00000302085 CRBNQ96SW2 442 aa28.99■■■□□ 2.23
SMAD1-201ENST00000302085 FLT4P35916 1363 aa28.99■■■□□ 2.23
SMAD1-201ENST00000302085 AMPHP49418 695 aa28.98■■■□□ 2.23
SMAD1-201ENST00000302085 AEBP1Q8IUX7 1158 aa28.98■■■□□ 2.23
SMAD1-201ENST00000302085 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.98■■■□□ 2.23
SMAD1-201ENST00000302085 FOXO3O43524 673 aa28.97■■■□□ 2.23
SMAD1-201ENST00000302085 SULT6B1Q6IMI4 303 aa28.97■■■□□ 2.23
SMAD1-201ENST00000302085 C1orf167Q5SNV9 1468 aa28.97■■■□□ 2.23
SMAD1-201ENST00000302085 FANCIQ9NVI1 1328 aa28.95■■■□□ 2.23
SMAD1-201ENST00000302085 NCOA3Q9Y6Q9 1424 aa28.95■■■□□ 2.22
SMAD1-201ENST00000302085 RGPD1P0DJD0 1748 aa28.95■■■□□ 2.22
SMAD1-201ENST00000302085 TSR2Q969E8 191 aaKnown RBP28.95■■■□□ 2.22
SMAD1-201ENST00000302085 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
SMAD1-201ENST00000302085 STRCQ7RTU9 1775 aa28.92■■■□□ 2.22
SMAD1-201ENST00000302085 XPCQ01831 940 aaPredicted RBP28.92■■■□□ 2.22
SMAD1-201ENST00000302085 KIF24Q5T7B8 1368 aa28.92■■■□□ 2.22
SMAD1-201ENST00000302085 ATF3P18847 181 aa28.92■■■□□ 2.22
SMAD1-201ENST00000302085 HOXC9P31274 260 aa28.91■■■□□ 2.22
SMAD1-201ENST00000302085 ARHGEF10O15013 1369 aa28.9■■■□□ 2.22
SMAD1-201ENST00000302085 MST1RQ04912 1400 aa28.89■■■□□ 2.22
SMAD1-201ENST00000302085 EXOSC9Q06265 439 aaKnown RBP28.89■■■□□ 2.22
SMAD1-201ENST00000302085 KRT28Q7Z3Y7 464 aa28.88■■■□□ 2.21
SMAD1-201ENST00000302085 TSHZ2Q9NRE2 1034 aa28.88■■■□□ 2.21
SMAD1-201ENST00000302085 EYA1Q99502 592 aa28.88■■■□□ 2.21
SMAD1-201ENST00000302085 THUMPD2Q9BTF0 503 aaKnown RBP28.88■■■□□ 2.21
SMAD1-201ENST00000302085 DCCP43146 1447 aa28.88■■■□□ 2.21
SMAD1-201ENST00000302085 KIF1AQ12756 1690 aa28.87■■■□□ 2.21
SMAD1-201ENST00000302085 CT47B1P0C2W7 299 aaPredicted RBP28.86■■■□□ 2.21
SMAD1-201ENST00000302085 DLG5Q8TDM6 1919 aa28.86■■■□□ 2.21
SMAD1-201ENST00000302085 NFAT5O94916 1531 aa28.85■■■□□ 2.21
SMAD1-201ENST00000302085 IGSF1Q8N6C5 1336 aa28.85■■■□□ 2.21
SMAD1-201ENST00000302085 LMOD3Q0VAK6 560 aa28.84■■■□□ 2.21
SMAD1-201ENST00000302085 CALD1Q05682 793 aaKnown RBP28.84■■■□□ 2.21
SMAD1-201ENST00000302085 KCNH5Q8NCM2 988 aa28.84■■■□□ 2.21
SMAD1-201ENST00000302085 TRPM3Q9HCF6 1732 aaPredicted RBP28.83■■■□□ 2.21
SMAD1-201ENST00000302085 CADPS2Q86UW7 1296 aa28.82■■■□□ 2.2
SMAD1-201ENST00000302085 KDRP35968 1356 aa28.82■■■□□ 2.2
SMAD1-201ENST00000302085 FAM83GA6ND36 823 aa28.82■■■□□ 2.2
SMAD1-201ENST00000302085 RTL1A6NKG5 1358 aa28.82■■■□□ 2.2
SMAD1-201ENST00000302085 ZNF853P0CG23 659 aa28.81■■■□□ 2.2
SMAD1-201ENST00000302085 IP6K1Q92551 441 aa28.81■■■□□ 2.2
SMAD1-201ENST00000302085 LAS1LQ9Y4W2 734 aaKnown RBP28.81■■■□□ 2.2
SMAD1-201ENST00000302085 PDE3AQ14432 1141 aa28.81■■■□□ 2.2
SMAD1-201ENST00000302085 BCL2L13Q9BXK5 485 aa28.81■■■□□ 2.2
SMAD1-201ENST00000302085 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
SMAD1-201ENST00000302085 LTN1O94822 1766 aa28.79■■■□□ 2.2
SMAD1-201ENST00000302085 MSH6P52701 1360 aa28.79■■■□□ 2.2
SMAD1-201ENST00000302085 GCP02774 474 aa28.79■■■□□ 2.2
SMAD1-201ENST00000302085 DCTN1Q14203 1278 aa28.79■■■□□ 2.2
SMAD1-201ENST00000302085 LMOD2Q6P5Q4 547 aa28.79■■■□□ 2.2
SMAD1-201ENST00000302085 FRAT1Q92837 279 aaPredicted RBP28.79■■■□□ 2.2
SMAD1-201ENST00000302085 LTV1Q96GA3 475 aaPredicted RBP28.79■■■□□ 2.2
SMAD1-201ENST00000302085 XIRP1Q702N8 1843 aaKnown RBP28.78■■■□□ 2.2
SMAD1-201ENST00000302085 GNAI1P63096 354 aa28.78■■■□□ 2.2
SMAD1-201ENST00000302085 SLIT3O75094 1523 aa28.77■■■□□ 2.2
SMAD1-201ENST00000302085 CANXP27824 592 aaKnown RBP28.77■■■□□ 2.2
SMAD1-201ENST00000302085 USP19O94966 1318 aa28.76■■■□□ 2.19
SMAD1-201ENST00000302085 DDX17Q92841 729 aaKnown RBP28.76■■■□□ 2.19
SMAD1-201ENST00000302085 ZNF335Q9H4Z2 1342 aaPredicted RBP28.76■■■□□ 2.19
SMAD1-201ENST00000302085 MTHFSDQ2M296 383 aaKnown RBP28.75■■■□□ 2.19
SMAD1-201ENST00000302085 CFAP44Q96MT7 982 aa28.75■■■□□ 2.19
SMAD1-201ENST00000302085 PANK1Q8TE04 598 aa28.74■■■□□ 2.19
SMAD1-201ENST00000302085 MBIPQ9NS73 344 aa28.74■■■□□ 2.19
SMAD1-201ENST00000302085 PLEKHG5O94827 1062 aa28.73■■■□□ 2.19
SMAD1-201ENST00000302085 ARHGEF25Q86VW2 580 aa28.73■■■□□ 2.19
SMAD1-201ENST00000302085 SSH1Q8WYL5 1049 aa28.73■■■□□ 2.19
SMAD1-201ENST00000302085 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
SMAD1-201ENST00000302085 TNNQ9UQP3 1299 aa28.71■■■□□ 2.19
SMAD1-201ENST00000302085 MCM10Q7L590 875 aa28.71■■■□□ 2.19
SMAD1-201ENST00000302085 SMC4Q9NTJ3 1288 aa28.71■■■□□ 2.19
SMAD1-201ENST00000302085 PHRF1Q9P1Y6 1649 aaKnown RBP28.7■■■□□ 2.19
SMAD1-201ENST00000302085 ALS2Q96Q42 1657 aa28.7■■■□□ 2.19
SMAD1-201ENST00000302085 COG6Q9Y2V7 657 aa28.69■■■□□ 2.18
SMAD1-201ENST00000302085 RLBP1P12271 317 aa28.68■■■□□ 2.18
SMAD1-201ENST00000302085 VAMP4O75379 141 aa28.68■■■□□ 2.18
SMAD1-201ENST00000302085 NPHP3Q7Z494 1330 aa28.68■■■□□ 2.18
SMAD1-201ENST00000302085 NBPF6Q5VWK0 638 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 ZKSCAN2Q63HK3 967 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 USHBP1Q8N6Y0 703 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 TSPYL6Q8N831 410 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 GAS2L2Q8NHY3 880 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 NBPF4Q96M43 638 aa28.67■■■□□ 2.18
SMAD1-201ENST00000302085 ALDH1L2Q3SY69 923 aa28.66■■■□□ 2.18
SMAD1-201ENST00000302085 CHL1O00533 1208 aa28.64■■■□□ 2.18
SMAD1-201ENST00000302085 MED1Q15648 1581 aaPredicted RBP28.64■■■□□ 2.18
SMAD1-201ENST00000302085 ZNF428Q96B54 188 aa28.64■■■□□ 2.18
SMAD1-201ENST00000302085 CRB1P82279 1406 aa28.64■■■□□ 2.18
SMAD1-201ENST00000302085 BRINP3Q76B58 766 aa28.64■■■□□ 2.17
SMAD1-201ENST00000302085 C8orf58Q8NAV2 365 aa28.63■■■□□ 2.17
SMAD1-201ENST00000302085 CLUAP1Q96AJ1 413 aa28.62■■■□□ 2.17
SMAD1-201ENST00000302085 NOB1Q9ULX3 412 aaKnown RBP28.62■■■□□ 2.17
SMAD1-201ENST00000302085 PXDNQ92626 1479 aa28.62■■■□□ 2.17
SMAD1-201ENST00000302085 KDM2BQ8NHM5 1336 aa28.61■■■□□ 2.17
SMAD1-201ENST00000302085 RTF1Q92541 710 aaKnown RBP28.61■■■□□ 2.17
SMAD1-201ENST00000302085 AXIN2Q9Y2T1 843 aa28.61■■■□□ 2.17
SMAD1-201ENST00000302085 ELL2O00472 640 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms