RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 VAMP4O75379 141 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 NME9Q86XW9 330 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
CTTN-201ENST00000301843 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 MED14O60244 1454 aa16.91■□□□□ 0.3
CTTN-201ENST00000301843 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
CTTN-201ENST00000301843 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
CTTN-201ENST00000301843 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
CTTN-201ENST00000301843 CHAMP1Q96JM3 812 aa16.91■□□□□ 0.3
CTTN-201ENST00000301843 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
CTTN-201ENST00000301843 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
CTTN-201ENST00000301843 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
CTTN-201ENST00000301843 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
CTTN-201ENST00000301843 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
CTTN-201ENST00000301843 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
CTTN-201ENST00000301843 MLECQ14165 292 aa16.89■□□□□ 0.29
CTTN-201ENST00000301843 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
CTTN-201ENST00000301843 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
CTTN-201ENST00000301843 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
CTTN-201ENST00000301843 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
CTTN-201ENST00000301843 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
CTTN-201ENST00000301843 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
CTTN-201ENST00000301843 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 FCHSD2O94868 740 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 REREQ9P2R6 1566 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 GSPT1P15170 499 aaKnown RBP16.87■□□□□ 0.29
CTTN-201ENST00000301843 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 MRE11P49959 708 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 PKP1Q13835 747 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 NFE2L2Q16236 605 aa16.87■□□□□ 0.29
CTTN-201ENST00000301843 DIP2BQ9P265 1576 aa16.86■□□□□ 0.29
CTTN-201ENST00000301843 AGLP35573 1532 aa16.86■□□□□ 0.29
CTTN-201ENST00000301843 IL16Q14005 1332 aa16.86■□□□□ 0.29
CTTN-201ENST00000301843 DDIT3P35638 169 aa16.86■□□□□ 0.29
CTTN-201ENST00000301843 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
CTTN-201ENST00000301843 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
CTTN-201ENST00000301843 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
CTTN-201ENST00000301843 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
CTTN-201ENST00000301843 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
CTTN-201ENST00000301843 K7ELQ4 463 aaPredicted RBP16.84■□□□□ 0.29
CTTN-201ENST00000301843 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
CTTN-201ENST00000301843 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
CTTN-201ENST00000301843 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
CTTN-201ENST00000301843 DLC1Q96QB1 1528 aa16.83■□□□□ 0.29
CTTN-201ENST00000301843 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.29
CTTN-201ENST00000301843 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
CTTN-201ENST00000301843 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
CTTN-201ENST00000301843 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
CTTN-201ENST00000301843 TSPOAP1O95153 1857 aa16.82■□□□□ 0.28
CTTN-201ENST00000301843 MCM10Q7L590 875 aa16.82■□□□□ 0.28
CTTN-201ENST00000301843 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
CTTN-201ENST00000301843 SNX21Q969T3 373 aa16.82■□□□□ 0.28
CTTN-201ENST00000301843 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
CTTN-201ENST00000301843 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
CTTN-201ENST00000301843 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
CTTN-201ENST00000301843 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
CTTN-201ENST00000301843 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
CTTN-201ENST00000301843 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
CTTN-201ENST00000301843 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
CTTN-201ENST00000301843 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 ESPNB1AK53 854 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 GNAI1P63096 354 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 PLEKHM2Q8IWE5 1019 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 RIMBP3CA6NJZ7 1639 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 RIMBP3BA6NNM3 1639 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 RIMBP3Q9UFD9 1639 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 IL13P35225 146 aa16.8■□□□□ 0.28
CTTN-201ENST00000301843 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 CDC45O75419 566 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CTTN-201ENST00000301843 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 ATP7BP35670 1465 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 CLCN1P35523 988 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
CTTN-201ENST00000301843 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
CTTN-201ENST00000301843 CDC42BPGQ6DT37 1551 aa16.79■□□□□ 0.28
CTTN-201ENST00000301843 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
CTTN-201ENST00000301843 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
CTTN-201ENST00000301843 CAVIN1Q6NZI2 390 aaKnown RBP16.77■□□□□ 0.28
CTTN-201ENST00000301843 F6X3S4 739 aa16.77■□□□□ 0.27
CTTN-201ENST00000301843 BAG4O95429 457 aaKnown RBP16.77■□□□□ 0.27
CTTN-201ENST00000301843 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.27
CTTN-201ENST00000301843 NECTIN2Q92692 538 aa16.77■□□□□ 0.27
CTTN-201ENST00000301843 MEIS3Q99687 375 aa16.77■□□□□ 0.27
CTTN-201ENST00000301843 ABCC4O15439 1325 aa16.76■□□□□ 0.27
CTTN-201ENST00000301843 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
CTTN-201ENST00000301843 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
CTTN-201ENST00000301843 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
CTTN-201ENST00000301843 NRXN3Q9Y4C0 1643 aa16.75■□□□□ 0.27
CTTN-201ENST00000301843 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
CTTN-201ENST00000301843 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
CTTN-201ENST00000301843 SDSP20132 328 aa16.74■□□□□ 0.27
CTTN-201ENST00000301843 FOXO3O43524 673 aa16.74■□□□□ 0.27
CTTN-201ENST00000301843 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
CTTN-201ENST00000301843 COG3Q96JB2 828 aa16.74■□□□□ 0.27
CTTN-201ENST00000301843 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
CTTN-201ENST00000301843 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms