RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-201ENST00000301475 NSD2O96028 1365 aa13.43□□□□□ -0.26
ZNF558-201ENST00000301475 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
ZNF558-201ENST00000301475 NUCB2P80303 420 aa13.43□□□□□ -0.26
ZNF558-201ENST00000301475 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
ZNF558-201ENST00000301475 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
ZNF558-201ENST00000301475 RABEP1Q15276 862 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
ZNF558-201ENST00000301475 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
ZNF558-201ENST00000301475 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
ZNF558-201ENST00000301475 NSFL1CQ9UNZ2 370 aaKnown RBP13.42□□□□□ -0.26
ZNF558-201ENST00000301475 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
ZNF558-201ENST00000301475 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
ZNF558-201ENST00000301475 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
ZNF558-201ENST00000301475 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
ZNF558-201ENST00000301475 EFCAB6Q5THR3 1501 aa13.41□□□□□ -0.26
ZNF558-201ENST00000301475 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
ZNF558-201ENST00000301475 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
ZNF558-201ENST00000301475 SYCE3A1L190 88 aa13.4□□□□□ -0.26
ZNF558-201ENST00000301475 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
ZNF558-201ENST00000301475 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
ZNF558-201ENST00000301475 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
ZNF558-201ENST00000301475 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
ZNF558-201ENST00000301475 PTCH1Q13635 1447 aa13.4□□□□□ -0.27
ZNF558-201ENST00000301475 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 PPLO60437 1756 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 MCM5P33992 734 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
ZNF558-201ENST00000301475 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
ZNF558-201ENST00000301475 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
ZNF558-201ENST00000301475 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
ZNF558-201ENST00000301475 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
ZNF558-201ENST00000301475 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
ZNF558-201ENST00000301475 MTERF4Q7Z6M4 381 aaKnown RBP13.38□□□□□ -0.27
ZNF558-201ENST00000301475 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
ZNF558-201ENST00000301475 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
ZNF558-201ENST00000301475 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-201ENST00000301475 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
ZNF558-201ENST00000301475 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
ZNF558-201ENST00000301475 POGZQ7Z3K3 1410 aa13.37□□□□□ -0.27
ZNF558-201ENST00000301475 ARHGEF28Q8N1W1 1705 aaKnown RBP13.37□□□□□ -0.27
ZNF558-201ENST00000301475 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
ZNF558-201ENST00000301475 GLI2P10070 1586 aa13.36□□□□□ -0.27
ZNF558-201ENST00000301475 TSPYL6Q8N831 410 aa13.36□□□□□ -0.27
ZNF558-201ENST00000301475 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
ZNF558-201ENST00000301475 ABCC4O15439 1325 aa13.36□□□□□ -0.27
ZNF558-201ENST00000301475 ATAD2Q6PL18 1390 aa13.36□□□□□ -0.27
ZNF558-201ENST00000301475 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
ZNF558-201ENST00000301475 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
ZNF558-201ENST00000301475 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-201ENST00000301475 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
ZNF558-201ENST00000301475 VAMP4O75379 141 aa13.34□□□□□ -0.27
ZNF558-201ENST00000301475 MLECQ14165 292 aa13.34□□□□□ -0.27
ZNF558-201ENST00000301475 TSC1Q92574 1164 aa13.34□□□□□ -0.27
ZNF558-201ENST00000301475 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
ZNF558-201ENST00000301475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
ZNF558-201ENST00000301475 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-201ENST00000301475 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
ZNF558-201ENST00000301475 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.28
ZNF558-201ENST00000301475 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-201ENST00000301475 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-201ENST00000301475 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
ZNF558-201ENST00000301475 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
ZNF558-201ENST00000301475 KIDINS220Q9ULH0 1771 aa13.33□□□□□ -0.28
ZNF558-201ENST00000301475 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
ZNF558-201ENST00000301475 YEATS2Q9ULM3 1422 aa13.32□□□□□ -0.28
ZNF558-201ENST00000301475 ST18O60284 1047 aa13.32□□□□□ -0.28
ZNF558-201ENST00000301475 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
ZNF558-201ENST00000301475 SAFB2Q14151 953 aaKnown RBP eCLIP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 MYRIPQ8NFW9 859 aa13.32□□□□□ -0.28
ZNF558-201ENST00000301475 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 CHMP4BQ9H444 224 aaKnown RBP13.32□□□□□ -0.28
ZNF558-201ENST00000301475 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 SDSP20132 328 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 MPNDQ8N594 471 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 FYB1O15117 783 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 DMTNQ08495 405 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
ZNF558-201ENST00000301475 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
ZNF558-201ENST00000301475 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
ZNF558-201ENST00000301475 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
ZNF558-201ENST00000301475 MBD3O95983 291 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms