RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZKSCAN2Q63HK3 967 aa28.06■■■□□ 2.08
TPM4-201ENST00000300933 NOB1Q9ULX3 412 aaKnown RBP28.06■■■□□ 2.08
TPM4-201ENST00000300933 NUTM2GQ5VZR2 741 aa28.05■■■□□ 2.08
TPM4-201ENST00000300933 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
TPM4-201ENST00000300933 PLEKHG3A1L390 1219 aa28.05■■■□□ 2.08
TPM4-201ENST00000300933 TRIM27P14373 513 aa28.05■■■□□ 2.08
TPM4-201ENST00000300933 DZIP1LQ8IYY4 767 aaKnown RBP28.04■■■□□ 2.08
TPM4-201ENST00000300933 SLC4A3P48751 1232 aa28.03■■■□□ 2.08
TPM4-201ENST00000300933 EIF4A2Q14240 407 aaKnown RBP28.03■■■□□ 2.08
TPM4-201ENST00000300933 SULT6B1Q6IMI4 303 aa28.03■■■□□ 2.08
TPM4-201ENST00000300933 AATKQ6ZMQ8 1374 aa28.03■■■□□ 2.08
TPM4-201ENST00000300933 MON2Q7Z3U7 1717 aa28.03■■■□□ 2.08
TPM4-201ENST00000300933 TSPYL6Q8N831 410 aa28.02■■■□□ 2.08
TPM4-201ENST00000300933 BRPF3Q9ULD4 1205 aa28.02■■■□□ 2.08
TPM4-201ENST00000300933 ITSN1Q15811 1721 aa28.01■■■□□ 2.07
TPM4-201ENST00000300933 IL16Q14005 1332 aa28.01■■■□□ 2.07
TPM4-201ENST00000300933 MVPQ14764 893 aaKnown RBP28■■■□□ 2.07
TPM4-201ENST00000300933 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
TPM4-201ENST00000300933 USP6P35125 1406 aa28■■■□□ 2.07
TPM4-201ENST00000300933 CDK12Q9NYV4 1490 aaPredicted RBP28■■■□□ 2.07
TPM4-201ENST00000300933 ARHGAP23Q9P227 1491 aa28■■■□□ 2.07
TPM4-201ENST00000300933 AKAP12Q02952 1782 aa27.99■■■□□ 2.07
TPM4-201ENST00000300933 SLIT1O75093 1534 aa27.99■■■□□ 2.07
TPM4-201ENST00000300933 C8orf34Q49A92 452 aa27.97■■■□□ 2.07
TPM4-201ENST00000300933 ATF7IPQ6VMQ6 1270 aa27.96■■■□□ 2.07
TPM4-201ENST00000300933 MBIPQ9NS73 344 aa27.96■■■□□ 2.07
TPM4-201ENST00000300933 TMEM57Q8N5G2 664 aa27.95■■■□□ 2.06
TPM4-201ENST00000300933 CT47B1P0C2W7 299 aaPredicted RBP27.95■■■□□ 2.06
TPM4-201ENST00000300933 RGPD8O14715 1765 aaPredicted RBP27.94■■■□□ 2.06
TPM4-201ENST00000300933 DDRGK1Q96HY6 314 aa27.94■■■□□ 2.06
TPM4-201ENST00000300933 GSE1Q14687 1217 aa27.94■■■□□ 2.06
TPM4-201ENST00000300933 FAM161AQ3B820 660 aa27.94■■■□□ 2.06
TPM4-201ENST00000300933 NFKBIBQ15653 356 aa27.93■■■□□ 2.06
TPM4-201ENST00000300933 PLEKHG5O94827 1062 aa27.92■■■□□ 2.06
TPM4-201ENST00000300933 MAP3K19Q56UN5 1328 aa27.92■■■□□ 2.06
TPM4-201ENST00000300933 MCM10Q7L590 875 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 OVOS2A0A0J9YW53 1432 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 OVOS2Q6IE36 1432 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 VAMP4O75379 141 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 C8orf58Q8NAV2 365 aa27.91■■■□□ 2.06
TPM4-201ENST00000300933 NLRP6P59044 892 aa27.9■■■□□ 2.06
TPM4-201ENST00000300933 KRT24Q2M2I5 525 aa27.89■■■□□ 2.06
TPM4-201ENST00000300933 PDZRN3Q9UPQ7 1066 aa27.89■■■□□ 2.05
TPM4-201ENST00000300933 DAXXQ9UER7 740 aaPredicted RBP27.88■■■□□ 2.05
TPM4-201ENST00000300933 GNAI1P63096 354 aa27.88■■■□□ 2.05
TPM4-201ENST00000300933 FOXO3O43524 673 aa27.87■■■□□ 2.05
TPM4-201ENST00000300933 TOPAZ1Q8N9V7 1692 aa27.87■■■□□ 2.05
TPM4-201ENST00000300933 DIP2AQ14689 1571 aa27.87■■■□□ 2.05
TPM4-201ENST00000300933 IFT57Q9NWB7 429 aa27.86■■■□□ 2.05
TPM4-201ENST00000300933 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
TPM4-201ENST00000300933 AMPHP49418 695 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
TPM4-201ENST00000300933 SSH2Q76I76 1423 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 ZNF853P0CG23 659 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 NRKQ7Z2Y5 1582 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 TWISTNBQ3B726 338 aaPredicted RBP27.85■■■□□ 2.05
TPM4-201ENST00000300933 MIS18AQ9NYP9 233 aa27.85■■■□□ 2.05
TPM4-201ENST00000300933 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
TPM4-201ENST00000300933 DLG5Q8TDM6 1919 aa27.84■■■□□ 2.05
TPM4-201ENST00000300933 CFAP44Q96MT7 982 aa27.84■■■□□ 2.05
TPM4-201ENST00000300933 LTV1Q96GA3 475 aaPredicted RBP27.84■■■□□ 2.05
TPM4-201ENST00000300933 SEC24BO95487 1268 aa27.83■■■□□ 2.05
TPM4-201ENST00000300933 PEAK1Q9H792 1746 aa27.83■■■□□ 2.05
TPM4-201ENST00000300933 DDX19BQ9UMR2 479 aa27.83■■■□□ 2.05
TPM4-201ENST00000300933 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
TPM4-201ENST00000300933 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
TPM4-201ENST00000300933 CALD1Q05682 793 aaKnown RBP27.82■■■□□ 2.04
TPM4-201ENST00000300933 ABTB2Q8N961 1025 aa27.82■■■□□ 2.04
TPM4-201ENST00000300933 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
TPM4-201ENST00000300933 ALDH1L2Q3SY69 923 aa27.81■■■□□ 2.04
TPM4-201ENST00000300933 MRPL50Q8N5N7 158 aaKnown RBP27.81■■■□□ 2.04
TPM4-201ENST00000300933 C1orf115Q9H7X2 142 aa27.81■■■□□ 2.04
TPM4-201ENST00000300933 USP31Q70CQ4 1352 aa27.8■■■□□ 2.04
TPM4-201ENST00000300933 TTC21AQ8NDW8 1320 aa27.8■■■□□ 2.04
TPM4-201ENST00000300933 LMOD3Q0VAK6 560 aa27.8■■■□□ 2.04
TPM4-201ENST00000300933 EYA1Q99502 592 aa27.78■■■□□ 2.04
TPM4-201ENST00000300933 ZBTB40Q9NUA8 1239 aa27.78■■■□□ 2.04
TPM4-201ENST00000300933 ZBTB7CA1YPR0 619 aa27.77■■■□□ 2.04
TPM4-201ENST00000300933 AAMPQ13685 434 aa27.77■■■□□ 2.04
TPM4-201ENST00000300933 MTHFSDQ2M296 383 aaKnown RBP27.76■■■□□ 2.03
TPM4-201ENST00000300933 XPCQ01831 940 aaPredicted RBP27.75■■■□□ 2.03
TPM4-201ENST00000300933 EIF5BO60841 1220 aaKnown RBP27.74■■■□□ 2.03
TPM4-201ENST00000300933 ESCO1Q5FWF5 840 aa27.74■■■□□ 2.03
TPM4-201ENST00000300933 XRN1Q8IZH2 1706 aaKnown RBP27.74■■■□□ 2.03
TPM4-201ENST00000300933 PHF8Q9UPP1 1060 aa27.73■■■□□ 2.03
TPM4-201ENST00000300933 USHBP1Q8N6Y0 703 aa27.72■■■□□ 2.03
TPM4-201ENST00000300933 FLT4P35916 1363 aa27.72■■■□□ 2.03
TPM4-201ENST00000300933 FRAT2O75474 233 aaPredicted RBP27.71■■■□□ 2.03
TPM4-201ENST00000300933 SBNO1A3KN83 1393 aa27.7■■■□□ 2.03
TPM4-201ENST00000300933 PIK3C2AO00443 1686 aa27.69■■■□□ 2.02
TPM4-201ENST00000300933 NALCNQ8IZF0 1738 aa27.68■■■□□ 2.02
TPM4-201ENST00000300933 ZBTB7BO15156 539 aaPredicted RBP27.68■■■□□ 2.02
TPM4-201ENST00000300933 HOXC9P31274 260 aa27.68■■■□□ 2.02
TPM4-201ENST00000300933 CHL1O00533 1208 aa27.68■■■□□ 2.02
TPM4-201ENST00000300933 ZNF428Q96B54 188 aa27.68■■■□□ 2.02
TPM4-201ENST00000300933 HDAC1Q13547 482 aaPredicted RBP27.67■■■□□ 2.02
TPM4-201ENST00000300933 SETD1BQ9UPS6 1966 aaKnown RBP27.67■■■□□ 2.02
TPM4-201ENST00000300933 PSME1Q06323 249 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms