RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
HERPUD1-201ENST00000300302 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
HERPUD1-201ENST00000300302 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
HERPUD1-201ENST00000300302 KRT28Q7Z3Y7 464 aa20.56■□□□□ 0.88
HERPUD1-201ENST00000300302 HMOX1P09601 288 aa20.56■□□□□ 0.88
HERPUD1-201ENST00000300302 KCNH5Q8NCM2 988 aa20.56■□□□□ 0.88
HERPUD1-201ENST00000300302 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
HERPUD1-201ENST00000300302 LTBP4Q8N2S1 1624 aa20.55■□□□□ 0.88
HERPUD1-201ENST00000300302 TRPM3Q9HCF6 1732 aaPredicted RBP20.54■□□□□ 0.88
HERPUD1-201ENST00000300302 DDX17Q92841 729 aaKnown RBP20.54■□□□□ 0.88
HERPUD1-201ENST00000300302 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
HERPUD1-201ENST00000300302 RTL1A6NKG5 1358 aa20.52■□□□□ 0.88
HERPUD1-201ENST00000300302 RIPK4P57078 832 aa20.52■□□□□ 0.88
HERPUD1-201ENST00000300302 SLAIN2Q9P270 581 aa20.52■□□□□ 0.88
HERPUD1-201ENST00000300302 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
HERPUD1-201ENST00000300302 RRP1P56182 461 aaKnown RBP20.51■□□□□ 0.87
HERPUD1-201ENST00000300302 RGPD1P0DJD0 1748 aa20.51■□□□□ 0.87
HERPUD1-201ENST00000300302 HOXC9P31274 260 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 NFAT5O94916 1531 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 ARHGEF10O15013 1369 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
HERPUD1-201ENST00000300302 LTN1O94822 1766 aa20.49■□□□□ 0.87
HERPUD1-201ENST00000300302 SLIT3O75094 1523 aa20.48■□□□□ 0.87
HERPUD1-201ENST00000300302 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
HERPUD1-201ENST00000300302 IL16Q14005 1332 aa20.47■□□□□ 0.87
HERPUD1-201ENST00000300302 USP19O94966 1318 aa20.47■□□□□ 0.87
HERPUD1-201ENST00000300302 ALS2Q96Q42 1657 aa20.47■□□□□ 0.87
HERPUD1-201ENST00000300302 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
HERPUD1-201ENST00000300302 PHRF1Q9P1Y6 1649 aaKnown RBP20.46■□□□□ 0.87
HERPUD1-201ENST00000300302 GCP02774 474 aa20.45■□□□□ 0.86
HERPUD1-201ENST00000300302 IP6K1Q92551 441 aa20.45■□□□□ 0.86
HERPUD1-201ENST00000300302 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
HERPUD1-201ENST00000300302 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
HERPUD1-201ENST00000300302 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
HERPUD1-201ENST00000300302 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
HERPUD1-201ENST00000300302 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
HERPUD1-201ENST00000300302 KDRP35968 1356 aa20.43■□□□□ 0.86
HERPUD1-201ENST00000300302 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
HERPUD1-201ENST00000300302 EYA1Q99502 592 aa20.42■□□□□ 0.86
HERPUD1-201ENST00000300302 PXDNQ92626 1479 aa20.42■□□□□ 0.86
HERPUD1-201ENST00000300302 TNS3Q68CZ2 1445 aa20.42■□□□□ 0.86
HERPUD1-201ENST00000300302 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
HERPUD1-201ENST00000300302 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.86
HERPUD1-201ENST00000300302 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.86
HERPUD1-201ENST00000300302 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
HERPUD1-201ENST00000300302 DLG5Q8TDM6 1919 aa20.38■□□□□ 0.85
HERPUD1-201ENST00000300302 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
HERPUD1-201ENST00000300302 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
HERPUD1-201ENST00000300302 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
HERPUD1-201ENST00000300302 MED1Q15648 1581 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-201ENST00000300302 PLIN1O60240 522 aa20.35■□□□□ 0.85
HERPUD1-201ENST00000300302 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
HERPUD1-201ENST00000300302 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
HERPUD1-201ENST00000300302 GNAI1P63096 354 aa20.35■□□□□ 0.85
HERPUD1-201ENST00000300302 GAS2L2Q8NHY3 880 aa20.34■□□□□ 0.85
HERPUD1-201ENST00000300302 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
HERPUD1-201ENST00000300302 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
HERPUD1-201ENST00000300302 BCAR3O75815 825 aa20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 ZC3H6P61129 1189 aaKnown RBP20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 MTHFSDQ2M296 383 aaKnown RBP20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
HERPUD1-201ENST00000300302 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 CABLES1Q8TDN4 633 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 FAM83GA6ND36 823 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 TOM1O60784 492 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 ANKRD24Q8TF21 1146 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 ROBO1Q9Y6N7 1651 aa20.3■□□□□ 0.84
HERPUD1-201ENST00000300302 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
HERPUD1-201ENST00000300302 ABCC6O95255 1503 aa20.29■□□□□ 0.84
HERPUD1-201ENST00000300302 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
HERPUD1-201ENST00000300302 NHSL1Q5SYE7 1610 aa20.29■□□□□ 0.84
HERPUD1-201ENST00000300302 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
HERPUD1-201ENST00000300302 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
HERPUD1-201ENST00000300302 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
HERPUD1-201ENST00000300302 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
HERPUD1-201ENST00000300302 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
HERPUD1-201ENST00000300302 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.84
HERPUD1-201ENST00000300302 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
HERPUD1-201ENST00000300302 CPDO75976 1380 aa20.27■□□□□ 0.83
HERPUD1-201ENST00000300302 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 ZNF428Q96B54 188 aa20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 MBIPQ9NS73 344 aa20.26■□□□□ 0.83
HERPUD1-201ENST00000300302 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
HERPUD1-201ENST00000300302 ERBB3P21860 1342 aa20.25■□□□□ 0.83
HERPUD1-201ENST00000300302 MCM10Q7L590 875 aa20.25■□□□□ 0.83
HERPUD1-201ENST00000300302 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms