RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 MST1RQ04912 1400 aa18.49■□□□□ 0.55
CDH16-201ENST00000299752 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
CDH16-201ENST00000299752 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
CDH16-201ENST00000299752 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
CDH16-201ENST00000299752 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
CDH16-201ENST00000299752 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
CDH16-201ENST00000299752 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
CDH16-201ENST00000299752 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
CDH16-201ENST00000299752 RIPK4P57078 832 aa18.47■□□□□ 0.55
CDH16-201ENST00000299752 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
CDH16-201ENST00000299752 FCHSD2O94868 740 aa18.46■□□□□ 0.55
CDH16-201ENST00000299752 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
CDH16-201ENST00000299752 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
CDH16-201ENST00000299752 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
CDH16-201ENST00000299752 MARF1Q9Y4F3 1742 aaKnown RBP18.45■□□□□ 0.54
CDH16-201ENST00000299752 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
CDH16-201ENST00000299752 C20orf194Q5TEA3 1177 aa18.44■□□□□ 0.54
CDH16-201ENST00000299752 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
CDH16-201ENST00000299752 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
CDH16-201ENST00000299752 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
CDH16-201ENST00000299752 NEFMP07197 916 aa18.43■□□□□ 0.54
CDH16-201ENST00000299752 HOXC9P31274 260 aa18.43■□□□□ 0.54
CDH16-201ENST00000299752 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
CDH16-201ENST00000299752 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
CDH16-201ENST00000299752 BCAR3O75815 825 aa18.42■□□□□ 0.54
CDH16-201ENST00000299752 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
CDH16-201ENST00000299752 FLT4P35916 1363 aa18.42■□□□□ 0.54
CDH16-201ENST00000299752 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
CDH16-201ENST00000299752 GCP02774 474 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
CDH16-201ENST00000299752 EYA1Q99502 592 aa18.4■□□□□ 0.54
CDH16-201ENST00000299752 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.54
CDH16-201ENST00000299752 MYH16Q9H6N6 1097 aa18.39■□□□□ 0.53
CDH16-201ENST00000299752 DCCP43146 1447 aa18.37■□□□□ 0.53
CDH16-201ENST00000299752 LTN1O94822 1766 aa18.37■□□□□ 0.53
CDH16-201ENST00000299752 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
CDH16-201ENST00000299752 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
CDH16-201ENST00000299752 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
CDH16-201ENST00000299752 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
CDH16-201ENST00000299752 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
CDH16-201ENST00000299752 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
CDH16-201ENST00000299752 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
CDH16-201ENST00000299752 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
CDH16-201ENST00000299752 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
CDH16-201ENST00000299752 AXIN2Q9Y2T1 843 aa18.34■□□□□ 0.53
CDH16-201ENST00000299752 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
CDH16-201ENST00000299752 NFAT5O94916 1531 aa18.34■□□□□ 0.53
CDH16-201ENST00000299752 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
CDH16-201ENST00000299752 IP6K1Q92551 441 aa18.33■□□□□ 0.52
CDH16-201ENST00000299752 MCM10Q7L590 875 aa18.33■□□□□ 0.52
CDH16-201ENST00000299752 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
CDH16-201ENST00000299752 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
CDH16-201ENST00000299752 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
CDH16-201ENST00000299752 IL16Q14005 1332 aa18.31■□□□□ 0.52
CDH16-201ENST00000299752 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
CDH16-201ENST00000299752 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
CDH16-201ENST00000299752 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
CDH16-201ENST00000299752 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
CDH16-201ENST00000299752 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
CDH16-201ENST00000299752 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
CDH16-201ENST00000299752 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
CDH16-201ENST00000299752 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
CDH16-201ENST00000299752 USP19O94966 1318 aa18.29■□□□□ 0.52
CDH16-201ENST00000299752 SPATA31A3Q5VYP0 1347 aa18.29■□□□□ 0.52
CDH16-201ENST00000299752 PXDNQ92626 1479 aa18.29■□□□□ 0.52
CDH16-201ENST00000299752 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
CDH16-201ENST00000299752 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.52
CDH16-201ENST00000299752 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.51
CDH16-201ENST00000299752 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
CDH16-201ENST00000299752 RGPD5Q99666 1765 aa18.26■□□□□ 0.51
CDH16-201ENST00000299752 PANK1Q8TE04 598 aa18.25■□□□□ 0.51
CDH16-201ENST00000299752 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
CDH16-201ENST00000299752 SLIT3O75094 1523 aa18.25■□□□□ 0.51
CDH16-201ENST00000299752 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
CDH16-201ENST00000299752 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
CDH16-201ENST00000299752 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
CDH16-201ENST00000299752 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
CDH16-201ENST00000299752 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
CDH16-201ENST00000299752 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
CDH16-201ENST00000299752 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
CDH16-201ENST00000299752 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
CDH16-201ENST00000299752 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
CDH16-201ENST00000299752 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
CDH16-201ENST00000299752 KDRP35968 1356 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 TSPYL6Q8N831 410 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 CLUAP1Q96AJ1 413 aa18.22■□□□□ 0.51
CDH16-201ENST00000299752 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms