RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
DEPDC4-201ENST00000299185 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
DEPDC4-201ENST00000299185 EID1Q9Y6B2 187 aa9.29□□□□□ -0.92
DEPDC4-201ENST00000299185 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
DEPDC4-201ENST00000299185 ROCK2O75116 1388 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-201ENST00000299185 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
DEPDC4-201ENST00000299185 ZDHHC16Q969W1 377 aa9.28□□□□□ -0.92
DEPDC4-201ENST00000299185 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-201ENST00000299185 KIAA1210Q9ULL0 1709 aa9.28□□□□□ -0.92
DEPDC4-201ENST00000299185 PLEKHH1Q9ULM0 1364 aa9.27□□□□□ -0.93
DEPDC4-201ENST00000299185 STK26Q9P289 416 aa9.27□□□□□ -0.93
DEPDC4-201ENST00000299185 NWD1Q149M9 1564 aa9.27□□□□□ -0.93
DEPDC4-201ENST00000299185 YTHDC2Q9H6S0 1430 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 ZNF335Q9H4Z2 1342 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 CPS1P31327 1500 aa9.26□□□□□ -0.93
DEPDC4-201ENST00000299185 ROBO2Q9HCK4 1378 aa9.25□□□□□ -0.93
DEPDC4-201ENST00000299185 KNDC1Q76NI1 1749 aa9.25□□□□□ -0.93
DEPDC4-201ENST00000299185 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
DEPDC4-201ENST00000299185 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
DEPDC4-201ENST00000299185 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-201ENST00000299185 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 SAFB2Q14151 953 aaKnown RBP eCLIP9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 Q6ZNB5 142 aa9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 TRAK1Q9UPV9 953 aa9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 LRPPRCP42704 1394 aaKnown RBP9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 USP47Q96K76 1375 aa9.24□□□□□ -0.93
DEPDC4-201ENST00000299185 IQSEC2Q5JU85 1478 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 KCNA6P17658 529 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 CARD11Q9BXL7 1154 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
DEPDC4-201ENST00000299185 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
DEPDC4-201ENST00000299185 CHD2O14647 1828 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-201ENST00000299185 EVI5O60447 810 aa9.22□□□□□ -0.93
DEPDC4-201ENST00000299185 PDE4AP27815 886 aa9.22□□□□□ -0.93
DEPDC4-201ENST00000299185 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 HSPA5P11021 654 aaKnown RBP9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 WAPLQ7Z5K2 1190 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 TBX22Q9Y458 520 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 TECPR2O15040 1411 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 DLC1Q96QB1 1528 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 TULP4Q9NRJ4 1543 aa9.21□□□□□ -0.94
DEPDC4-201ENST00000299185 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 HDGFP51858 240 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 PRAM1Q96QH2 718 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 AMOTL2Q9Y2J4 779 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 NKTRP30414 1462 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-201ENST00000299185 XIRP1Q702N8 1843 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-201ENST00000299185 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-201ENST00000299185 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-201ENST00000299185 LRRC7Q96NW7 1537 aa9.19□□□□□ -0.94
DEPDC4-201ENST00000299185 TMEM94Q12767 1356 aa9.18□□□□□ -0.94
DEPDC4-201ENST00000299185 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-201ENST00000299185 ABCC11Q96J66 1382 aa9.17□□□□□ -0.94
DEPDC4-201ENST00000299185 CENPJQ9HC77 1338 aaPredicted RBP9.17□□□□□ -0.94
DEPDC4-201ENST00000299185 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
DEPDC4-201ENST00000299185 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
DEPDC4-201ENST00000299185 KCNC4Q03721 635 aa9.17□□□□□ -0.94
DEPDC4-201ENST00000299185 ADGRL3Q9HAR2 1447 aa9.16□□□□□ -0.94
DEPDC4-201ENST00000299185 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
DEPDC4-201ENST00000299185 MAP3K9P80192 1104 aa9.16□□□□□ -0.94
DEPDC4-201ENST00000299185 ADGRB2O60241 1585 aa9.16□□□□□ -0.94
DEPDC4-201ENST00000299185 FAM135BQ49AJ0 1406 aa9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 NUTM2FA1L443 756 aa9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 POGKQ9P215 609 aa9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
DEPDC4-201ENST00000299185 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 ONECUT3O60422 494 aaPredicted RBP9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 EIF4G2P78344 907 aaKnown RBP eCLIP9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 TESK2Q96S53 571 aa9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 CDC42BPGQ6DT37 1551 aa9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 FMN2Q9NZ56 1722 aa9.14□□□□□ -0.95
DEPDC4-201ENST00000299185 PRR36Q9H6K5 1346 aa9.13□□□□□ -0.95
DEPDC4-201ENST00000299185 BCAMP50895 628 aa9.13□□□□□ -0.95
DEPDC4-201ENST00000299185 PROX2Q3B8N5 592 aa9.13□□□□□ -0.95
DEPDC4-201ENST00000299185 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
DEPDC4-201ENST00000299185 MYOM1P52179 1685 aa9.13□□□□□ -0.95
DEPDC4-201ENST00000299185 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-201ENST00000299185 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
DEPDC4-201ENST00000299185 ATP7BP35670 1465 aa9.12□□□□□ -0.95
DEPDC4-201ENST00000299185 TOPAZ1Q8N9V7 1692 aa9.11□□□□□ -0.95
DEPDC4-201ENST00000299185 COL9A1P20849 921 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms