RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SBNO1A3KN83 1393 aa17.64■□□□□ 0.41
CHMP4C-201ENST00000297265 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
CHMP4C-201ENST00000297265 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
CHMP4C-201ENST00000297265 FLT4P35916 1363 aa17.62■□□□□ 0.41
CHMP4C-201ENST00000297265 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 NEFMP07197 916 aa17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
CHMP4C-201ENST00000297265 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
CHMP4C-201ENST00000297265 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
CHMP4C-201ENST00000297265 HSPA2P54652 639 aa17.6■□□□□ 0.41
CHMP4C-201ENST00000297265 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
CHMP4C-201ENST00000297265 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
CHMP4C-201ENST00000297265 FAM83GA6ND36 823 aa17.58■□□□□ 0.41
CHMP4C-201ENST00000297265 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
CHMP4C-201ENST00000297265 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.41
CHMP4C-201ENST00000297265 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.41
CHMP4C-201ENST00000297265 KDRP35968 1356 aa17.58■□□□□ 0.4
CHMP4C-201ENST00000297265 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
CHMP4C-201ENST00000297265 PANK1Q8TE04 598 aa17.58■□□□□ 0.4
CHMP4C-201ENST00000297265 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
CHMP4C-201ENST00000297265 RLBP1P12271 317 aa17.57■□□□□ 0.4
CHMP4C-201ENST00000297265 HOXC9P31274 260 aa17.57■□□□□ 0.4
CHMP4C-201ENST00000297265 PSME1Q06323 249 aa17.57■□□□□ 0.4
CHMP4C-201ENST00000297265 EYA1Q99502 592 aa17.57■□□□□ 0.4
CHMP4C-201ENST00000297265 FOXO3O43524 673 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 AMPHP49418 695 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 NFAT5O94916 1531 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
CHMP4C-201ENST00000297265 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
CHMP4C-201ENST00000297265 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 TRPM3Q9HCF6 1732 aaPredicted RBP17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 LTN1O94822 1766 aa17.54■□□□□ 0.4
CHMP4C-201ENST00000297265 LMTK3Q96Q04 1460 aa17.53■□□□□ 0.4
CHMP4C-201ENST00000297265 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
CHMP4C-201ENST00000297265 GNAI1P63096 354 aa17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 NCOA3Q9Y6Q9 1424 aa17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
CHMP4C-201ENST00000297265 VAMP4O75379 141 aa17.52■□□□□ 0.39
CHMP4C-201ENST00000297265 TSPYL6Q8N831 410 aa17.52■□□□□ 0.39
CHMP4C-201ENST00000297265 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.39
CHMP4C-201ENST00000297265 MST1RQ04912 1400 aa17.52■□□□□ 0.39
CHMP4C-201ENST00000297265 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 IP6K1Q92551 441 aa17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
CHMP4C-201ENST00000297265 DCCP43146 1447 aa17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 BRPF1P55201 1214 aaPredicted RBP17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 ZKSCAN2Q63HK3 967 aa17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 SLIT3O75094 1523 aa17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 XIRP1Q702N8 1843 aaKnown RBP17.49■□□□□ 0.39
CHMP4C-201ENST00000297265 TRIM27P14373 513 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 MCM10Q7L590 875 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 IGHDP01880 384 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
CHMP4C-201ENST00000297265 CRB1P82279 1406 aa17.47■□□□□ 0.39
CHMP4C-201ENST00000297265 CHL1O00533 1208 aa17.47■□□□□ 0.39
CHMP4C-201ENST00000297265 GCP02774 474 aa17.47■□□□□ 0.39
CHMP4C-201ENST00000297265 ZNF428Q96B54 188 aa17.47■□□□□ 0.39
CHMP4C-201ENST00000297265 USP19O94966 1318 aa17.46■□□□□ 0.39
CHMP4C-201ENST00000297265 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
CHMP4C-201ENST00000297265 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.38
CHMP4C-201ENST00000297265 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.38
CHMP4C-201ENST00000297265 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.38
CHMP4C-201ENST00000297265 ATF3P18847 181 aa17.45■□□□□ 0.38
CHMP4C-201ENST00000297265 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
CHMP4C-201ENST00000297265 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
CHMP4C-201ENST00000297265 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 AAMPQ13685 434 aa17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms