RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 HSP90AB1P08238 724 aaKnown RBP23.91■■□□□ 1.42
TRA2A-201ENST00000297071 DLC1Q96QB1 1528 aa23.91■■□□□ 1.42
TRA2A-201ENST00000297071 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
TRA2A-201ENST00000297071 GZF1Q9H116 711 aaPredicted RBP23.91■■□□□ 1.42
TRA2A-201ENST00000297071 DLG5Q8TDM6 1919 aa23.9■■□□□ 1.42
TRA2A-201ENST00000297071 K7ELQ4 463 aaPredicted RBP23.89■■□□□ 1.42
TRA2A-201ENST00000297071 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.42
TRA2A-201ENST00000297071 LNPKQ9C0E8 428 aa23.89■■□□□ 1.42
TRA2A-201ENST00000297071 GGNBP2Q9H3C7 697 aa23.89■■□□□ 1.42
TRA2A-201ENST00000297071 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.41
TRA2A-201ENST00000297071 ABCC4O15439 1325 aa23.89■■□□□ 1.41
TRA2A-201ENST00000297071 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
TRA2A-201ENST00000297071 ESPNB1AK53 854 aa23.88■■□□□ 1.41
TRA2A-201ENST00000297071 GGT6Q6P531 493 aa23.88■■□□□ 1.41
TRA2A-201ENST00000297071 MRPL50Q8N5N7 158 aaKnown RBP23.88■■□□□ 1.41
TRA2A-201ENST00000297071 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
TRA2A-201ENST00000297071 RICTORQ6R327 1708 aa23.86■■□□□ 1.41
TRA2A-201ENST00000297071 IFT57Q9NWB7 429 aa23.86■■□□□ 1.41
TRA2A-201ENST00000297071 VAMP4O75379 141 aa23.85■■□□□ 1.41
TRA2A-201ENST00000297071 NFE2L2Q16236 605 aa23.85■■□□□ 1.41
TRA2A-201ENST00000297071 ALKQ9UM73 1620 aa23.84■■□□□ 1.41
TRA2A-201ENST00000297071 GNAI1P63096 354 aa23.84■■□□□ 1.41
TRA2A-201ENST00000297071 GOLGA6L22H0YM25 854 aa23.84■■□□□ 1.41
TRA2A-201ENST00000297071 ZNF853P0CG23 659 aa23.84■■□□□ 1.41
TRA2A-201ENST00000297071 PPP1R9BQ96SB3 815 aa23.84■■□□□ 1.41
TRA2A-201ENST00000297071 CDC45O75419 566 aa23.83■■□□□ 1.41
TRA2A-201ENST00000297071 TBC1D9Q6ZT07 1266 aa23.83■■□□□ 1.41
TRA2A-201ENST00000297071 CDK12Q9NYV4 1490 aaPredicted RBP23.83■■□□□ 1.41
TRA2A-201ENST00000297071 RRP9O43818 475 aaKnown RBP23.82■■□□□ 1.4
TRA2A-201ENST00000297071 CCDC173Q0VFZ6 552 aa23.82■■□□□ 1.4
TRA2A-201ENST00000297071 ANKRD45Q5TZF3 282 aa23.82■■□□□ 1.4
TRA2A-201ENST00000297071 KNDC1Q76NI1 1749 aa23.82■■□□□ 1.4
TRA2A-201ENST00000297071 KLHL40Q2TBA0 621 aa23.81■■□□□ 1.4
TRA2A-201ENST00000297071 API5Q9BZZ5 524 aaKnown RBP23.81■■□□□ 1.4
TRA2A-201ENST00000297071 RABEP1Q15276 862 aa23.8■■□□□ 1.4
TRA2A-201ENST00000297071 GLIPR1L2Q4G1C9 344 aa23.8■■□□□ 1.4
TRA2A-201ENST00000297071 TRIM44Q96DX7 344 aaPredicted RBP23.8■■□□□ 1.4
TRA2A-201ENST00000297071 NAP1L5Q96NT1 182 aaPredicted RBP23.8■■□□□ 1.4
TRA2A-201ENST00000297071 LMOD3Q0VAK6 560 aa23.8■■□□□ 1.4
TRA2A-201ENST00000297071 IDI1Q13907 227 aa23.8■■□□□ 1.4
TRA2A-201ENST00000297071 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
TRA2A-201ENST00000297071 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
TRA2A-201ENST00000297071 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
TRA2A-201ENST00000297071 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
TRA2A-201ENST00000297071 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
TRA2A-201ENST00000297071 PRKAR2BP31323 418 aa23.77■■□□□ 1.4
TRA2A-201ENST00000297071 NUCB2P80303 420 aa23.77■■□□□ 1.4
TRA2A-201ENST00000297071 TPM2P07951 284 aa23.77■■□□□ 1.4
TRA2A-201ENST00000297071 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
TRA2A-201ENST00000297071 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
TRA2A-201ENST00000297071 ZNF445P59923 1031 aa23.75■■□□□ 1.39
TRA2A-201ENST00000297071 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
TRA2A-201ENST00000297071 HS1BP3Q53T59 392 aa23.75■■□□□ 1.39
TRA2A-201ENST00000297071 PRAM1Q96QH2 718 aa23.75■■□□□ 1.39
TRA2A-201ENST00000297071 DCTPP1Q9H773 170 aa23.74■■□□□ 1.39
TRA2A-201ENST00000297071 CWC22Q9HCG8 908 aaKnown RBP23.74■■□□□ 1.39
TRA2A-201ENST00000297071 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
TRA2A-201ENST00000297071 EDC4Q6P2E9 1401 aaKnown RBP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 CYP2E1P05181 493 aaPredicted RBP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 TERF1P54274 439 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 ARXQ96QS3 562 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 NRKQ7Z2Y5 1582 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 CD2BP2O95400 341 aaKnown RBP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 BAG4O95429 457 aaKnown RBP23.73■■□□□ 1.39
TRA2A-201ENST00000297071 GAS2L2Q8NHY3 880 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
TRA2A-201ENST00000297071 MINK1Q8N4C8 1332 aaPredicted RBP23.72■■□□□ 1.39
TRA2A-201ENST00000297071 AK9Q5TCS8 1911 aa23.72■■□□□ 1.39
TRA2A-201ENST00000297071 PLEKHM2Q8IWE5 1019 aa23.7■■□□□ 1.39
TRA2A-201ENST00000297071 TTC22Q5TAA0 569 aa23.7■■□□□ 1.38
TRA2A-201ENST00000297071 INTS3Q68E01 1043 aaKnown RBP23.7■■□□□ 1.38
TRA2A-201ENST00000297071 ANP32BQ92688 251 aaKnown RBP23.7■■□□□ 1.38
TRA2A-201ENST00000297071 SSFA2P28290 1259 aa23.69■■□□□ 1.38
TRA2A-201ENST00000297071 IL13P35225 146 aa23.69■■□□□ 1.38
TRA2A-201ENST00000297071 SAFB2Q14151 953 aaKnown RBP eCLIP23.69■■□□□ 1.381e-8■■□□□ 12.9
TRA2A-201ENST00000297071 TWISTNBQ3B726 338 aaPredicted RBP23.69■■□□□ 1.38
TRA2A-201ENST00000297071 STK26Q9P289 416 aa23.69■■□□□ 1.38
TRA2A-201ENST00000297071 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
TRA2A-201ENST00000297071 MBIPQ9NS73 344 aa23.68■■□□□ 1.38
TRA2A-201ENST00000297071 NASPP49321 788 aaPredicted RBP23.68■■□□□ 1.38
TRA2A-201ENST00000297071 ZSCAN30Q86W11 494 aa23.68■■□□□ 1.38
TRA2A-201ENST00000297071 RPAP2Q8IXW5 612 aaPredicted RBP23.68■■□□□ 1.38
TRA2A-201ENST00000297071 TUBGCP6Q96RT7 1819 aa23.67■■□□□ 1.38
TRA2A-201ENST00000297071 C3P01024 1663 aa23.67■■□□□ 1.38
TRA2A-201ENST00000297071 GSPT1P15170 499 aaKnown RBP23.67■■□□□ 1.38
TRA2A-201ENST00000297071 HSP90AA2PQ14568 343 aaPredicted RBP23.67■■□□□ 1.38
TRA2A-201ENST00000297071 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
TRA2A-201ENST00000297071 USP26Q9BXU7 913 aa23.67■■□□□ 1.38
TRA2A-201ENST00000297071 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
TRA2A-201ENST00000297071 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
TRA2A-201ENST00000297071 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
TRA2A-201ENST00000297071 ANKRD44Q8N8A2 993 aa23.66■■□□□ 1.38
TRA2A-201ENST00000297071 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
TRA2A-201ENST00000297071 ILDR2Q71H61 639 aa23.66■■□□□ 1.38
TRA2A-201ENST00000297071 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
TRA2A-201ENST00000297071 DDX49Q9Y6V7 483 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms