RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
CMBL-201ENST00000296658 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
CMBL-201ENST00000296658 PPM1GO15355 546 aaPredicted RBP19.02■□□□□ 0.64
CMBL-201ENST00000296658 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
CMBL-201ENST00000296658 FOXO3O43524 673 aa19.01■□□□□ 0.63
CMBL-201ENST00000296658 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
CMBL-201ENST00000296658 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
CMBL-201ENST00000296658 SLC4A3P48751 1232 aa19■□□□□ 0.63
CMBL-201ENST00000296658 NGEFQ8N5V2 710 aa19■□□□□ 0.63
CMBL-201ENST00000296658 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
CMBL-201ENST00000296658 RGS3P49796 1198 aa18.99■□□□□ 0.63
CMBL-201ENST00000296658 NLRP6P59044 892 aa18.99■□□□□ 0.63
CMBL-201ENST00000296658 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
CMBL-201ENST00000296658 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
CMBL-201ENST00000296658 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
CMBL-201ENST00000296658 TRPM3Q9HCF6 1732 aaPredicted RBP18.98■□□□□ 0.63
CMBL-201ENST00000296658 MARF1Q9Y4F3 1742 aaKnown RBP18.98■□□□□ 0.63
CMBL-201ENST00000296658 IGHDP01880 384 aa18.97■□□□□ 0.63
CMBL-201ENST00000296658 FBLN1P23142 703 aa18.97■□□□□ 0.63
CMBL-201ENST00000296658 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
CMBL-201ENST00000296658 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
CMBL-201ENST00000296658 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
CMBL-201ENST00000296658 EMILIN1Q9Y6C2 1016 aa18.95■□□□□ 0.62
CMBL-201ENST00000296658 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
CMBL-201ENST00000296658 PDE3AQ14432 1141 aa18.95■□□□□ 0.62
CMBL-201ENST00000296658 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
CMBL-201ENST00000296658 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.62
CMBL-201ENST00000296658 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
CMBL-201ENST00000296658 SBNO1A3KN83 1393 aa18.94■□□□□ 0.62
CMBL-201ENST00000296658 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
CMBL-201ENST00000296658 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
CMBL-201ENST00000296658 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
CMBL-201ENST00000296658 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
CMBL-201ENST00000296658 PANK1Q8TE04 598 aa18.92■□□□□ 0.62
CMBL-201ENST00000296658 ALS2Q96Q42 1657 aa18.91■□□□□ 0.62
CMBL-201ENST00000296658 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
CMBL-201ENST00000296658 NFKBIBQ15653 356 aa18.91■□□□□ 0.62
CMBL-201ENST00000296658 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
CMBL-201ENST00000296658 PXDNQ92626 1479 aa18.9■□□□□ 0.62
CMBL-201ENST00000296658 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
CMBL-201ENST00000296658 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
CMBL-201ENST00000296658 CLUAP1Q96AJ1 413 aa18.89■□□□□ 0.61
CMBL-201ENST00000296658 MAP3K19Q56UN5 1328 aa18.89■□□□□ 0.61
CMBL-201ENST00000296658 PEAK1Q9H792 1746 aa18.89■□□□□ 0.61
CMBL-201ENST00000296658 IL13P35225 146 aa18.89■□□□□ 0.61
CMBL-201ENST00000296658 SLIT3O75094 1523 aa18.89■□□□□ 0.61
CMBL-201ENST00000296658 U2SURPO15042 1029 aaKnown RBP18.88■□□□□ 0.61
CMBL-201ENST00000296658 USP19O94966 1318 aa18.88■□□□□ 0.61
CMBL-201ENST00000296658 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
CMBL-201ENST00000296658 CCDC27Q2M243 656 aa18.88■□□□□ 0.61
CMBL-201ENST00000296658 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
CMBL-201ENST00000296658 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
CMBL-201ENST00000296658 DAXXQ9UER7 740 aaPredicted RBP18.87■□□□□ 0.61
CMBL-201ENST00000296658 NFAT5O94916 1531 aa18.87■□□□□ 0.61
CMBL-201ENST00000296658 FLT4P35916 1363 aa18.87■□□□□ 0.61
CMBL-201ENST00000296658 SOX12O15370 315 aa18.86■□□□□ 0.61
CMBL-201ENST00000296658 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
CMBL-201ENST00000296658 TNS3Q68CZ2 1445 aa18.86■□□□□ 0.61
CMBL-201ENST00000296658 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
CMBL-201ENST00000296658 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
CMBL-201ENST00000296658 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
CMBL-201ENST00000296658 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
CMBL-201ENST00000296658 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
CMBL-201ENST00000296658 AMPHP49418 695 aa18.85■□□□□ 0.61
CMBL-201ENST00000296658 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
CMBL-201ENST00000296658 FCHSD2O94868 740 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
CMBL-201ENST00000296658 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 NHSL1Q5SYE7 1610 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 GCP02774 474 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 RLBP1P12271 317 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
CMBL-201ENST00000296658 SEC24BO95487 1268 aa18.83■□□□□ 0.61
CMBL-201ENST00000296658 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.61
CMBL-201ENST00000296658 IL27Q8NEV9 243 aa18.83■□□□□ 0.61
CMBL-201ENST00000296658 BCL2L13Q9BXK5 485 aa18.83■□□□□ 0.61
CMBL-201ENST00000296658 TNNQ9UQP3 1299 aa18.83■□□□□ 0.61
CMBL-201ENST00000296658 PHRF1Q9P1Y6 1649 aaKnown RBP18.83■□□□□ 0.6
CMBL-201ENST00000296658 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.6
CMBL-201ENST00000296658 LTN1O94822 1766 aa18.82■□□□□ 0.6
CMBL-201ENST00000296658 HOXC9P31274 260 aa18.82■□□□□ 0.6
CMBL-201ENST00000296658 PCDHB15Q9Y5E8 787 aa18.82■□□□□ 0.6
CMBL-201ENST00000296658 GSE1Q14687 1217 aa18.81■□□□□ 0.6
CMBL-201ENST00000296658 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
CMBL-201ENST00000296658 MAPK8IP3Q9UPT6 1336 aa18.81■□□□□ 0.6
CMBL-201ENST00000296658 IP6K1Q92551 441 aa18.8■□□□□ 0.6
CMBL-201ENST00000296658 TMPOP42166 694 aaKnown RBP18.8■□□□□ 0.6
CMBL-201ENST00000296658 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
CMBL-201ENST00000296658 TSR2Q969E8 191 aaKnown RBP18.8■□□□□ 0.6
CMBL-201ENST00000296658 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
CMBL-201ENST00000296658 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
CMBL-201ENST00000296658 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
CMBL-201ENST00000296658 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
CMBL-201ENST00000296658 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.6
CMBL-201ENST00000296658 FRAT2O75474 233 aaPredicted RBP18.77■□□□□ 0.6
CMBL-201ENST00000296658 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.59
CMBL-201ENST00000296658 AAMPQ13685 434 aa18.77■□□□□ 0.59
CMBL-201ENST00000296658 AHDC1Q5TGY3 1603 aaPredicted RBP18.75■□□□□ 0.59
CMBL-201ENST00000296658 HMOX1P09601 288 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms