RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
RFC4-201ENST00000296273 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
RFC4-201ENST00000296273 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
RFC4-201ENST00000296273 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
RFC4-201ENST00000296273 BCL9O00512 1426 aa15.17■□□□□ 0.02
RFC4-201ENST00000296273 KCNH5Q8NCM2 988 aa15.16■□□□□ 0.02
RFC4-201ENST00000296273 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
RFC4-201ENST00000296273 BCL11BQ9C0K0 894 aaPredicted RBP15.16■□□□□ 0.02
RFC4-201ENST00000296273 EVC2Q86UK5 1308 aa15.16■□□□□ 0.02
RFC4-201ENST00000296273 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
RFC4-201ENST00000296273 PIK3C2AO00443 1686 aa15.13■□□□□ 0.01
RFC4-201ENST00000296273 COL18A1P39060 1754 aa15.13■□□□□ 0.01
RFC4-201ENST00000296273 CPSF1Q10570 1443 aaKnown RBP15.13■□□□□ 0.01
RFC4-201ENST00000296273 ARHGEF25Q86VW2 580 aa15.13■□□□□ 0.01
RFC4-201ENST00000296273 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
RFC4-201ENST00000296273 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
RFC4-201ENST00000296273 AXIN2Q9Y2T1 843 aa15.12■□□□□ 0.01
RFC4-201ENST00000296273 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
RFC4-201ENST00000296273 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
RFC4-201ENST00000296273 WNK3Q9BYP7 1800 aa15.11■□□□□ 0.01
RFC4-201ENST00000296273 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
RFC4-201ENST00000296273 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
RFC4-201ENST00000296273 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
RFC4-201ENST00000296273 AKAP12Q02952 1782 aa15.1■□□□□ 0.01
RFC4-201ENST00000296273 CASZ1Q86V15 1759 aa15.1■□□□□ 0.01
RFC4-201ENST00000296273 CCDC7Q96M83 1385 aa15.1■□□□□ 0.01
RFC4-201ENST00000296273 EXOC5O00471 708 aa15.1■□□□□ 0.01
RFC4-201ENST00000296273 CSB-PGBD3P0DP91 1061 aa15.1■□□□□ 0.01
RFC4-201ENST00000296273 ABCC6O95255 1503 aa15.09■□□□□ 0.01
RFC4-201ENST00000296273 PROM2Q8N271 834 aa15.09■□□□□ 0.01
RFC4-201ENST00000296273 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
RFC4-201ENST00000296273 TXNRD1Q16881 649 aa15.07■□□□□ 0
RFC4-201ENST00000296273 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
RFC4-201ENST00000296273 STK32BQ9NY57 414 aa15.07■□□□□ 0
RFC4-201ENST00000296273 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
RFC4-201ENST00000296273 SLC15A2Q16348 729 aa15.06■□□□□ 0
RFC4-201ENST00000296273 TNS2Q63HR2 1409 aa15.06■□□□□ 0
RFC4-201ENST00000296273 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
RFC4-201ENST00000296273 NFAT5O94916 1531 aa15.06■□□□□ 0
RFC4-201ENST00000296273 SOX12O15370 315 aa15.05■□□□□ -0
RFC4-201ENST00000296273 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
RFC4-201ENST00000296273 ZBTB7AO95365 584 aa15.04■□□□□ -0
RFC4-201ENST00000296273 PTGER2P43116 358 aa15.04■□□□□ -0
RFC4-201ENST00000296273 RGPD5Q99666 1765 aa15.04■□□□□ -0
RFC4-201ENST00000296273 PDGFDQ9GZP0 370 aaPredicted RBP15.03■□□□□ -0
RFC4-201ENST00000296273 MTFR1LQ9H019 292 aa15.03■□□□□ -0
RFC4-201ENST00000296273 USP31Q70CQ4 1352 aa15.02■□□□□ -0
RFC4-201ENST00000296273 SBNO2Q9Y2G9 1366 aa15.02■□□□□ -0
RFC4-201ENST00000296273 ERBB3P21860 1342 aa15.02□□□□□ -0.01
RFC4-201ENST00000296273 MYOM1P52179 1685 aa15.01□□□□□ -0.01
RFC4-201ENST00000296273 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
RFC4-201ENST00000296273 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
RFC4-201ENST00000296273 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
RFC4-201ENST00000296273 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
RFC4-201ENST00000296273 SYT17Q9BSW7 474 aa15□□□□□ -0.01
RFC4-201ENST00000296273 IL2RBP14784 551 aa14.99□□□□□ -0.01
RFC4-201ENST00000296273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
RFC4-201ENST00000296273 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
RFC4-201ENST00000296273 FHDC1Q9C0D6 1143 aaPredicted RBP14.98□□□□□ -0.01
RFC4-201ENST00000296273 NLRP2Q9NX02 1062 aa14.98□□□□□ -0.01
RFC4-201ENST00000296273 CLSPNQ9HAW4 1339 aa14.98□□□□□ -0.01
RFC4-201ENST00000296273 HDGFL2Q7Z4V5 671 aaPredicted RBP14.98□□□□□ -0.01
RFC4-201ENST00000296273 ACSBG1Q96GR2 724 aa14.98□□□□□ -0.01
RFC4-201ENST00000296273 SGIP1Q9BQI5 828 aa14.98□□□□□ -0.01
RFC4-201ENST00000296273 PAPPAQ13219 1627 aa14.96□□□□□ -0.01
RFC4-201ENST00000296273 NEUROD1Q13562 356 aa14.96□□□□□ -0.02
RFC4-201ENST00000296273 ZNF784Q8NCA9 323 aaPredicted RBP14.96□□□□□ -0.02
RFC4-201ENST00000296273 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.02
RFC4-201ENST00000296273 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
RFC4-201ENST00000296273 EDC4Q6P2E9 1401 aaKnown RBP14.95□□□□□ -0.02
RFC4-201ENST00000296273 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
RFC4-201ENST00000296273 NME9Q86XW9 330 aa14.95□□□□□ -0.02
RFC4-201ENST00000296273 ARXQ96QS3 562 aa14.95□□□□□ -0.02
RFC4-201ENST00000296273 LTN1O94822 1766 aa14.95□□□□□ -0.02
RFC4-201ENST00000296273 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
RFC4-201ENST00000296273 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
RFC4-201ENST00000296273 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
RFC4-201ENST00000296273 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
RFC4-201ENST00000296273 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
RFC4-201ENST00000296273 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
RFC4-201ENST00000296273 BTAF1O14981 1849 aa14.93□□□□□ -0.02
RFC4-201ENST00000296273 IP6K1Q92551 441 aa14.91□□□□□ -0.02
RFC4-201ENST00000296273 SLC12A5Q9H2X9 1139 aa14.91□□□□□ -0.02
RFC4-201ENST00000296273 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
RFC4-201ENST00000296273 ZNF827Q17R98 1081 aa14.9□□□□□ -0.02
RFC4-201ENST00000296273 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
RFC4-201ENST00000296273 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
RFC4-201ENST00000296273 POLD1P28340 1107 aa14.89□□□□□ -0.03
RFC4-201ENST00000296273 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
RFC4-201ENST00000296273 CHD4Q14839 1912 aa14.89□□□□□ -0.03
RFC4-201ENST00000296273 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
RFC4-201ENST00000296273 UTRNP46939 3433 aa14.87□□□□□ -0.03
RFC4-201ENST00000296273 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
RFC4-201ENST00000296273 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
RFC4-201ENST00000296273 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
RFC4-201ENST00000296273 GPR162Q16538 588 aa14.86□□□□□ -0.03
RFC4-201ENST00000296273 COG3Q96JB2 828 aa14.85□□□□□ -0.03
RFC4-201ENST00000296273 TFCP2L1Q9NZI6 479 aa14.85□□□□□ -0.03
RFC4-201ENST00000296273 PNPLA7Q6ZV29 1317 aa14.85□□□□□ -0.03
RFC4-201ENST00000296273 HMGB2P26583 209 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms