RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
SSRP1-202ENST00000293880 TXLNAP40222 546 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 CCDC102AQ96A19 550 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 ZFP91Q96JP5 570 aaPredicted RBP19.1■□□□□ 0.65
SSRP1-202ENST00000293880 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 CGNQ9P2M7 1197 aaKnown RBP19.1■□□□□ 0.65
SSRP1-202ENST00000293880 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
SSRP1-202ENST00000293880 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
SSRP1-202ENST00000293880 KIF6Q6ZMV9 814 aa19.09■□□□□ 0.65
SSRP1-202ENST00000293880 CYP46A1Q9Y6A2 500 aa19.09■□□□□ 0.65
SSRP1-202ENST00000293880 CCDC69A6NI79 296 aa19.09■□□□□ 0.65
SSRP1-202ENST00000293880 MYL6BP14649 208 aa19.09■□□□□ 0.65
SSRP1-202ENST00000293880 ZNHIT6Q9NWK9 470 aaKnown RBP19.09■□□□□ 0.65
SSRP1-202ENST00000293880 PPP2R1AP30153 589 aa19.08■□□□□ 0.65
SSRP1-202ENST00000293880 ERLIN2O94905 339 aa19.08■□□□□ 0.64
SSRP1-202ENST00000293880 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
SSRP1-202ENST00000293880 GNAI2P04899 355 aa19.07■□□□□ 0.64
SSRP1-202ENST00000293880 CWC27Q6UX04 472 aaKnown RBP19.07■□□□□ 0.64
SSRP1-202ENST00000293880 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
SSRP1-202ENST00000293880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSRP1-202ENST00000293880 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
SSRP1-202ENST00000293880 RRP9O43818 475 aaKnown RBP19.07■□□□□ 0.64
SSRP1-202ENST00000293880 SYCE3A1L190 88 aa19.06■□□□□ 0.64
SSRP1-202ENST00000293880 ATF3P18847 181 aa19.06■□□□□ 0.64
SSRP1-202ENST00000293880 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
SSRP1-202ENST00000293880 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
SSRP1-202ENST00000293880 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
SSRP1-202ENST00000293880 PDRG1Q9NUG6 133 aa19.05■□□□□ 0.64
SSRP1-202ENST00000293880 NESP48681 1621 aa19.04■□□□□ 0.64
SSRP1-202ENST00000293880 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
SSRP1-202ENST00000293880 LRRCC1Q9C099 1032 aa19.04■□□□□ 0.64
SSRP1-202ENST00000293880 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
SSRP1-202ENST00000293880 HMGN5P82970 282 aaKnown RBP19.03■□□□□ 0.64
SSRP1-202ENST00000293880 DDX11Q96FC9 970 aa19.03■□□□□ 0.64
SSRP1-202ENST00000293880 JAKMIP1Q96N16 626 aaKnown RBP19.03■□□□□ 0.64
SSRP1-202ENST00000293880 SSBP05455 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
SSRP1-202ENST00000293880 NLRP6P59044 892 aa19.03■□□□□ 0.64
SSRP1-202ENST00000293880 MATR3P43243 847 aaKnown RBP eCLIP19.02■□□□□ 0.64
SSRP1-202ENST00000293880 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
SSRP1-202ENST00000293880 SLC3A2P08195 630 aaKnown RBP19.02■□□□□ 0.64
SSRP1-202ENST00000293880 GNAI3P08754 354 aa19.02■□□□□ 0.64
SSRP1-202ENST00000293880 BRD4O60885 1362 aaPredicted RBP19.02■□□□□ 0.64
SSRP1-202ENST00000293880 AACSQ86V21 672 aa19.02■□□□□ 0.63
SSRP1-202ENST00000293880 GCC1Q96CN9 775 aa19.02■□□□□ 0.63
SSRP1-202ENST00000293880 MIA2Q96PC5 1412 aa19.02■□□□□ 0.63
SSRP1-202ENST00000293880 HIP1O00291 1037 aa19.01■□□□□ 0.63
SSRP1-202ENST00000293880 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
SSRP1-202ENST00000293880 ZRSR2Q15696 482 aaKnown RBP19.01■□□□□ 0.63
SSRP1-202ENST00000293880 GOLGA6L7A0A1B0GV03 622 aa19.01■□□□□ 0.63
SSRP1-202ENST00000293880 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
SSRP1-202ENST00000293880 WDR33Q9C0J8 1336 aaKnown RBP19.01■□□□□ 0.63
SSRP1-202ENST00000293880 SSR1P43307 286 aaKnown RBP19■□□□□ 0.63
SSRP1-202ENST00000293880 WWC2Q6AWC2 1192 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 KIAA1328Q86T90 577 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 BACH2Q9BYV9 841 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 PPP1R1BQ9UD71 204 aaPredicted RBP19■□□□□ 0.63
SSRP1-202ENST00000293880 IGF1RP08069 1367 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
SSRP1-202ENST00000293880 CCDC85AQ96PX6 553 aaPredicted RBP19■□□□□ 0.63
SSRP1-202ENST00000293880 NUP62CLQ9H1M0 184 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 IL1RAPL2Q9NP60 686 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 DACH1Q9UI36 760 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 PDCP20941 246 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 ZMYND15Q9H091 742 aa19■□□□□ 0.63
SSRP1-202ENST00000293880 MCM2P49736 904 aa18.99■□□□□ 0.63
SSRP1-202ENST00000293880 EIF3JO75822 258 aaKnown RBP18.99■□□□□ 0.63
SSRP1-202ENST00000293880 DNA2P51530 1060 aa18.99■□□□□ 0.63
SSRP1-202ENST00000293880 KRT85P78386 507 aa18.99■□□□□ 0.63
SSRP1-202ENST00000293880 SRRTQ9BXP5 876 aaKnown RBP18.99■□□□□ 0.63
SSRP1-202ENST00000293880 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
SSRP1-202ENST00000293880 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
SSRP1-202ENST00000293880 GOLGA6L10A0A0M3HER8 536 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 CBFA2T2O43439 604 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 ERLIN1O75477 346 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 PDCL2Q8N4E4 241 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 CASTP20810 708 aaKnown RBP18.98■□□□□ 0.63
SSRP1-202ENST00000293880 RBM5P52756 815 aaKnown RBP eCLIP18.98■□□□□ 0.63
SSRP1-202ENST00000293880 CCDC113Q9H0I3 377 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 INCENPQ9NQS7 918 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 UPF3BQ9BZI7 483 aaKnown RBP18.98■□□□□ 0.63
SSRP1-202ENST00000293880 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
SSRP1-202ENST00000293880 ESCO1Q5FWF5 840 aa18.97■□□□□ 0.63
SSRP1-202ENST00000293880 STIM1Q13586 685 aa18.97■□□□□ 0.63
SSRP1-202ENST00000293880 USP8P40818 1118 aa18.97■□□□□ 0.63
SSRP1-202ENST00000293880 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■□□□□ 8.9
SSRP1-202ENST00000293880 LARP6Q9BRS8 491 aaKnown RBP18.97■□□□□ 0.63
SSRP1-202ENST00000293880 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.62
SSRP1-202ENST00000293880 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.62
SSRP1-202ENST00000293880 CASQ1P31415 396 aa18.95■□□□□ 0.62
SSRP1-202ENST00000293880 NF2P35240 595 aa18.95■□□□□ 0.62
SSRP1-202ENST00000293880 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
SSRP1-202ENST00000293880 XPCQ01831 940 aaPredicted RBP18.95■□□□□ 0.62
SSRP1-202ENST00000293880 TRIM22Q8IYM9 498 aa18.95■□□□□ 0.62
SSRP1-202ENST00000293880 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
SSRP1-202ENST00000293880 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
SSRP1-202ENST00000293880 CCDC83Q8IWF9 413 aa18.94■□□□□ 0.62
SSRP1-202ENST00000293880 USP5P45974 858 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms