RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RREB1Q92766 1687 aa35.8■■■■□ 3.32
U2AF1-201ENST00000291552 LRP5O75197 1615 aa35.79■■■■□ 3.32
U2AF1-201ENST00000291552 USP31Q70CQ4 1352 aa35.79■■■■□ 3.32
U2AF1-201ENST00000291552 LTN1O94822 1766 aa35.79■■■■□ 3.32
U2AF1-201ENST00000291552 SBF2Q86WG5 1849 aa35.78■■■■□ 3.32
U2AF1-201ENST00000291552 ABCC6O95255 1503 aa35.78■■■■□ 3.32
U2AF1-201ENST00000291552 WDR17Q8IZU2 1322 aa35.78■■■■□ 3.32
U2AF1-201ENST00000291552 TESK2Q96S53 571 aa35.77■■■■□ 3.32
U2AF1-201ENST00000291552 SLC12A5Q9H2X9 1139 aa35.77■■■■□ 3.32
U2AF1-201ENST00000291552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.76■■■■□ 3.32
U2AF1-201ENST00000291552 PSDA5PKW4 1024 aaPredicted RBP35.75■■■■□ 3.31
U2AF1-201ENST00000291552 EZH2Q15910 746 aaKnown RBP35.75■■■■□ 3.31
U2AF1-201ENST00000291552 NME9Q86XW9 330 aa35.75■■■■□ 3.31
U2AF1-201ENST00000291552 TMC1Q8TDI8 760 aa35.75■■■■□ 3.31
U2AF1-201ENST00000291552 A0A1W2PP64 1363 aa35.75■■■■□ 3.31
U2AF1-201ENST00000291552 NUP188Q5SRE5 1749 aa35.74■■■■□ 3.31
U2AF1-201ENST00000291552 TOM1L2Q6ZVM7 507 aa35.74■■■■□ 3.31
U2AF1-201ENST00000291552 CAMKK2Q96RR4 588 aa35.74■■■■□ 3.31
U2AF1-201ENST00000291552 EDC4Q6P2E9 1401 aaKnown RBP35.74■■■■□ 3.31
U2AF1-201ENST00000291552 ST20-MTHFSA0A0A6YYL1 179 aa35.71■■■■□ 3.31
U2AF1-201ENST00000291552 PUS7Q96PZ0 661 aaKnown RBP35.71■■■■□ 3.31
U2AF1-201ENST00000291552 OVOS2A0A0G2JMS6 1433 aa35.69■■■■□ 3.3
U2AF1-201ENST00000291552 OVOS2A0A0J9YW53 1432 aa35.69■■■■□ 3.3
U2AF1-201ENST00000291552 OVOS2Q6IE36 1432 aa35.69■■■■□ 3.3
U2AF1-201ENST00000291552 APBA3O96018 575 aa35.69■■■■□ 3.3
U2AF1-201ENST00000291552 HDGFL2Q7Z4V5 671 aaPredicted RBP35.68■■■■□ 3.3
U2AF1-201ENST00000291552 PARD3Q8TEW0 1356 aa35.66■■■■□ 3.3
U2AF1-201ENST00000291552 CARD10Q9BWT7 1032 aa35.64■■■■□ 3.3
U2AF1-201ENST00000291552 DDB1Q16531 1140 aa35.63■■■■□ 3.29
U2AF1-201ENST00000291552 TERF2IPQ9NYB0 399 aa35.63■■■■□ 3.29
U2AF1-201ENST00000291552 RGPD3A6NKT7 1758 aaPredicted RBP35.63■■■■□ 3.29
U2AF1-201ENST00000291552 RGPD4Q7Z3J3 1758 aa35.63■■■■□ 3.29
U2AF1-201ENST00000291552 R3HDM1Q15032 1099 aaKnown RBP35.62■■■■□ 3.29
U2AF1-201ENST00000291552 NINLQ9Y2I6 1382 aa35.62■■■■□ 3.29
U2AF1-201ENST00000291552 CSB-PGBD3P0DP91 1061 aa35.61■■■■□ 3.29
U2AF1-201ENST00000291552 USP47Q96K76 1375 aa35.59■■■■□ 3.29
U2AF1-201ENST00000291552 MARCH10Q8NA82 808 aaPredicted RBP35.58■■■■□ 3.29
U2AF1-201ENST00000291552 CDCA7Q9BWT1 371 aaPredicted RBP35.58■■■■□ 3.29
U2AF1-201ENST00000291552 ERBB3P21860 1342 aa35.57■■■■□ 3.29
U2AF1-201ENST00000291552 CCDC7Q96M83 1385 aa35.57■■■■□ 3.28
U2AF1-201ENST00000291552 C11orf95C9JLR9 678 aaPredicted RBP35.56■■■■□ 3.28
U2AF1-201ENST00000291552 BCL9O00512 1426 aa35.55■■■■□ 3.28
U2AF1-201ENST00000291552 PTF1AQ7RTS3 328 aa35.54■■■■□ 3.28
U2AF1-201ENST00000291552 TNS2Q63HR2 1409 aa35.53■■■■□ 3.28
U2AF1-201ENST00000291552 ANKRD36BQ8N2N9 1353 aa35.5■■■■□ 3.27
U2AF1-201ENST00000291552 FAM208AQ9UK61 1670 aaKnown RBP35.49■■■■□ 3.27
U2AF1-201ENST00000291552 SLC24A1O60721 1099 aa35.48■■■■□ 3.27
U2AF1-201ENST00000291552 MYOM1P52179 1685 aa35.48■■■■□ 3.27
U2AF1-201ENST00000291552 ANKRD24Q8TF21 1146 aa35.47■■■■□ 3.27
U2AF1-201ENST00000291552 NLRP2Q9NX02 1062 aa35.46■■■■□ 3.27
U2AF1-201ENST00000291552 BCL11BQ9C0K0 894 aaPredicted RBP35.45■■■■□ 3.27
U2AF1-201ENST00000291552 NHSQ6T4R5 1651 aa35.45■■■■□ 3.27
U2AF1-201ENST00000291552 RGPD2P0DJD1 1756 aa35.44■■■■□ 3.26
U2AF1-201ENST00000291552 KIF20BQ96Q89 1820 aa35.43■■■■□ 3.26
U2AF1-201ENST00000291552 EXOC5O00471 708 aa35.43■■■■□ 3.26
U2AF1-201ENST00000291552 TMF1P82094 1093 aa35.43■■■■□ 3.26
U2AF1-201ENST00000291552 PLSCR1O15162 318 aa35.41■■■■□ 3.26
U2AF1-201ENST00000291552 IP6K1Q92551 441 aa35.41■■■■□ 3.26
U2AF1-201ENST00000291552 MAP3K19Q56UN5 1328 aa35.39■■■■□ 3.26
U2AF1-201ENST00000291552 FBLN1P23142 703 aa35.39■■■■□ 3.26
U2AF1-201ENST00000291552 COG3Q96JB2 828 aa35.39■■■■□ 3.26
U2AF1-201ENST00000291552 IL2RBP14784 551 aa35.37■■■■□ 3.25
U2AF1-201ENST00000291552 CLSPNQ9HAW4 1339 aa35.36■■■■□ 3.25
U2AF1-201ENST00000291552 NBPF14Q5TI25 921 aa35.36■■■■□ 3.25
U2AF1-201ENST00000291552 TIMELESSQ9UNS1 1208 aa35.36■■■■□ 3.25
U2AF1-201ENST00000291552 PROM2Q8N271 834 aa35.35■■■■□ 3.25
U2AF1-201ENST00000291552 PCGF6Q9BYE7 350 aa35.35■■■■□ 3.25
U2AF1-201ENST00000291552 CASZ1Q86V15 1759 aa35.34■■■■□ 3.25
U2AF1-201ENST00000291552 ANO8Q9HCE9 1232 aaPredicted RBP35.34■■■■□ 3.25
U2AF1-201ENST00000291552 KAT6BQ8WYB5 2073 aa35.34■■■■□ 3.25
U2AF1-201ENST00000291552 BTAF1O14981 1849 aa35.34■■■■□ 3.25
U2AF1-201ENST00000291552 SHANK3Q9BYB0 1731 aa35.32■■■■□ 3.25
U2AF1-201ENST00000291552 FYB1O15117 783 aa35.32■■■■□ 3.24
U2AF1-201ENST00000291552 KCNQ2O43526 872 aa35.32■■■■□ 3.24
U2AF1-201ENST00000291552 HOXC9P31274 260 aa35.32■■■■□ 3.24
U2AF1-201ENST00000291552 LTV1Q96GA3 475 aaPredicted RBP35.32■■■■□ 3.24
U2AF1-201ENST00000291552 GGNBP2Q9H3C7 697 aa35.3■■■■□ 3.24
U2AF1-201ENST00000291552 RTL1A6NKG5 1358 aa35.28■■■■□ 3.24
U2AF1-201ENST00000291552 RRS1Q15050 365 aaKnown RBP35.26■■■■□ 3.24
U2AF1-201ENST00000291552 CDCA8Q53HL2 280 aa35.26■■■■□ 3.24
U2AF1-201ENST00000291552 ACSBG1Q96GR2 724 aa35.26■■■■□ 3.24
U2AF1-201ENST00000291552 AMPHP49418 695 aa35.25■■■■□ 3.23
U2AF1-201ENST00000291552 TXNRD1Q16881 649 aa35.23■■■■□ 3.23
U2AF1-201ENST00000291552 CARD14Q9BXL6 1004 aa35.23■■■■□ 3.23
U2AF1-201ENST00000291552 PAPPAQ13219 1627 aa35.23■■■■□ 3.23
U2AF1-201ENST00000291552 MEGF6O75095 1541 aa35.22■■■■□ 3.23
U2AF1-201ENST00000291552 NSD3Q9BZ95 1437 aa35.22■■■■□ 3.23
U2AF1-201ENST00000291552 DOT1LQ8TEK3 1739 aa35.21■■■■□ 3.23
U2AF1-201ENST00000291552 PDGFDQ9GZP0 370 aaPredicted RBP35.17■■■■□ 3.22
U2AF1-201ENST00000291552 ANKRD26Q9UPS8 1709 aa35.17■■■■□ 3.22
U2AF1-201ENST00000291552 NBPF6Q5VWK0 638 aa35.14■■■■□ 3.22
U2AF1-201ENST00000291552 NBPF4Q96M43 638 aa35.14■■■■□ 3.22
U2AF1-201ENST00000291552 DDX54Q8TDD1 881 aaKnown RBP35.13■■■■□ 3.21
U2AF1-201ENST00000291552 SPON1Q9HCB6 807 aa35.13■■■■□ 3.21
U2AF1-201ENST00000291552 INSRP06213 1382 aa35.12■■■■□ 3.21
U2AF1-201ENST00000291552 USHBP1Q8N6Y0 703 aa35.11■■■■□ 3.21
U2AF1-201ENST00000291552 FLT4P35916 1363 aa35.11■■■■□ 3.21
U2AF1-201ENST00000291552 MAP2P11137 1827 aaKnown RBP35.09■■■■□ 3.21
U2AF1-201ENST00000291552 SMG6Q86US8 1419 aaKnown RBP35.09■■■■□ 3.21
U2AF1-201ENST00000291552 HSP90AB2PQ58FF8 381 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms