RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CARD14Q9BXL6 1004 aa34.78■■■■□ 3.16
PDF-201ENST00000288022 KIF20BQ96Q89 1820 aa34.77■■■■□ 3.16
PDF-201ENST00000288022 C11orf95C9JLR9 678 aaPredicted RBP34.77■■■■□ 3.16
PDF-201ENST00000288022 ONECUT3O60422 494 aaPredicted RBP34.77■■■■□ 3.16
PDF-201ENST00000288022 GGNBP2Q9H3C7 697 aa34.77■■■■□ 3.16
PDF-201ENST00000288022 FYB1O15117 783 aa34.76■■■■□ 3.16
PDF-201ENST00000288022 AXIN2Q9Y2T1 843 aa34.76■■■■□ 3.16
PDF-201ENST00000288022 LTN1O94822 1766 aa34.76■■■■□ 3.15
PDF-201ENST00000288022 RGPD5Q99666 1765 aa34.74■■■■□ 3.15
PDF-201ENST00000288022 BRWD3Q6RI45 1802 aa34.74■■■■□ 3.15
PDF-201ENST00000288022 UPF1Q92900 1129 aaKnown RBP eCLIP34.72■■■■□ 3.15
PDF-201ENST00000288022 ABCC6O95255 1503 aa34.71■■■■□ 3.15
PDF-201ENST00000288022 CRB1P82279 1406 aa34.71■■■■□ 3.15
PDF-201ENST00000288022 CSB-PGBD3P0DP91 1061 aa34.7■■■■□ 3.15
PDF-201ENST00000288022 TOM1L2Q6ZVM7 507 aa34.7■■■■□ 3.15
PDF-201ENST00000288022 TCP11L2Q8N4U5 519 aa34.69■■■■□ 3.14
PDF-201ENST00000288022 WDR17Q8IZU2 1322 aa34.68■■■■□ 3.14
PDF-201ENST00000288022 THSD7AQ9UPZ6 1657 aa34.67■■■■□ 3.14
PDF-201ENST00000288022 KIF7Q2M1P5 1343 aa34.67■■■■□ 3.14
PDF-201ENST00000288022 KRT27Q7Z3Y8 459 aa34.67■■■■□ 3.14
PDF-201ENST00000288022 PANK3Q9H999 370 aa34.67■■■■□ 3.14
PDF-201ENST00000288022 CGNL1Q0VF96 1302 aa34.66■■■■□ 3.14
PDF-201ENST00000288022 FBLN1P23142 703 aa34.65■■■■□ 3.14
PDF-201ENST00000288022 BARGINQ6ZT62 677 aa34.65■■■■□ 3.14
PDF-201ENST00000288022 THRAP3Q9Y2W1 955 aaKnown RBP34.64■■■■□ 3.14
PDF-201ENST00000288022 MAP3K19Q56UN5 1328 aa34.62■■■■□ 3.13
PDF-201ENST00000288022 AMPHP49418 695 aa34.61■■■■□ 3.13
PDF-201ENST00000288022 IP6K1Q92551 441 aa34.59■■■■□ 3.13
PDF-201ENST00000288022 BLMP54132 1417 aaPredicted RBP34.58■■■■□ 3.13
PDF-201ENST00000288022 RRS1Q15050 365 aaKnown RBP34.58■■■■□ 3.13
PDF-201ENST00000288022 ANKRD24Q8TF21 1146 aa34.58■■■■□ 3.13
PDF-201ENST00000288022 ERBB3P21860 1342 aa34.57■■■■□ 3.13
PDF-201ENST00000288022 CARD10Q9BWT7 1032 aa34.56■■■■□ 3.12
PDF-201ENST00000288022 NLRP2Q9NX02 1062 aa34.55■■■■□ 3.12
PDF-201ENST00000288022 HOXC9P31274 260 aa34.54■■■■□ 3.12
PDF-201ENST00000288022 LTV1Q96GA3 475 aaPredicted RBP34.54■■■■□ 3.12
PDF-201ENST00000288022 CCDC7Q96M83 1385 aa34.52■■■■□ 3.12
PDF-201ENST00000288022 PDE3BQ13370 1112 aa34.52■■■■□ 3.12
PDF-201ENST00000288022 FAM182BQ5T319 152 aa34.52■■■■□ 3.12
PDF-201ENST00000288022 RTL1A6NKG5 1358 aa34.51■■■■□ 3.12
PDF-201ENST00000288022 ANKRD26Q9UPS8 1709 aa34.51■■■■□ 3.12
PDF-201ENST00000288022 KNSTRNQ9Y448 316 aa34.51■■■■□ 3.12
PDF-201ENST00000288022 WNK3Q9BYP7 1800 aa34.51■■■■□ 3.11
PDF-201ENST00000288022 PARP4Q9UKK3 1724 aaKnown RBP34.5■■■■□ 3.11
PDF-201ENST00000288022 WASHC2AQ641Q2 1341 aa34.49■■■■□ 3.11
PDF-201ENST00000288022 CCDC125Q86Z20 511 aa34.47■■■■□ 3.11
PDF-201ENST00000288022 CDCA7Q9BWT1 371 aaPredicted RBP34.47■■■■□ 3.11
PDF-201ENST00000288022 NSD2O96028 1365 aa34.46■■■■□ 3.11
PDF-201ENST00000288022 FAM208AQ9UK61 1670 aaKnown RBP34.45■■■■□ 3.11
PDF-201ENST00000288022 TNNT2P45379 298 aaPredicted RBP34.45■■■■□ 3.11
PDF-201ENST00000288022 LRRC37A3O60309 1634 aa34.44■■■■□ 3.1
PDF-201ENST00000288022 PPM1GO15355 546 aaPredicted RBP34.44■■■■□ 3.1
PDF-201ENST00000288022 DDB1Q16531 1140 aa34.44■■■■□ 3.1
PDF-201ENST00000288022 EMILIN1Q9Y6C2 1016 aa34.44■■■■□ 3.1
PDF-201ENST00000288022 FLT4P35916 1363 aa34.44■■■■□ 3.1
PDF-201ENST00000288022 PEAK1Q9H792 1746 aa34.44■■■■□ 3.1
PDF-201ENST00000288022 KIF24Q5T7B8 1368 aa34.42■■■■□ 3.1
PDF-201ENST00000288022 SF3B2Q13435 895 aaKnown RBP34.42■■■■□ 3.1
PDF-201ENST00000288022 DISP2A7MBM2 1401 aa34.41■■■■□ 3.1
PDF-201ENST00000288022 SMG6Q86US8 1419 aaKnown RBP34.41■■■■□ 3.1
PDF-201ENST00000288022 HSP90AB2PQ58FF8 381 aa34.4■■■■□ 3.1
PDF-201ENST00000288022 FAM196AQ6ZSG2 479 aa34.4■■■■□ 3.1
PDF-201ENST00000288022 EP400Q96L91 3159 aa34.39■■■■□ 3.1
PDF-201ENST00000288022 INSRP06213 1382 aa34.39■■■■□ 3.1
PDF-201ENST00000288022 MORC1Q86VD1 984 aa34.39■■■■□ 3.1
PDF-201ENST00000288022 MAP2P11137 1827 aaKnown RBP34.39■■■■□ 3.1
PDF-201ENST00000288022 IL2RBP14784 551 aa34.37■■■■□ 3.09
PDF-201ENST00000288022 EXOC5O00471 708 aa34.36■■■■□ 3.09
PDF-201ENST00000288022 RGPD2P0DJD1 1756 aa34.36■■■■□ 3.09
PDF-201ENST00000288022 POLKQ9UBT6 870 aa34.35■■■■□ 3.09
PDF-201ENST00000288022 AMER1Q5JTC6 1135 aaPredicted RBP34.34■■■■□ 3.09
PDF-201ENST00000288022 RGPD1P0DJD0 1748 aa34.33■■■■□ 3.09
PDF-201ENST00000288022 OVOS2A0A0G2JMS6 1433 aa34.31■■■■□ 3.08
PDF-201ENST00000288022 PER1O15534 1290 aaPredicted RBP34.31■■■■□ 3.08
PDF-201ENST00000288022 TNS2Q63HR2 1409 aa34.3■■■■□ 3.08
PDF-201ENST00000288022 TRIM37O94972 964 aa34.3■■■■□ 3.08
PDF-201ENST00000288022 NBPF6Q5VWK0 638 aa34.3■■■■□ 3.08
PDF-201ENST00000288022 NBPF4Q96M43 638 aa34.3■■■■□ 3.08
PDF-201ENST00000288022 DEFB132Q7Z7B7 95 aa34.28■■■■□ 3.08
PDF-201ENST00000288022 USHBP1Q8N6Y0 703 aa34.28■■■■□ 3.08
PDF-201ENST00000288022 MARCH10Q8NA82 808 aaPredicted RBP34.28■■■■□ 3.08
PDF-201ENST00000288022 CC2D1BQ5T0F9 858 aaKnown RBP34.27■■■■□ 3.08
PDF-201ENST00000288022 BAG6P46379 1132 aa34.26■■■■□ 3.08
PDF-201ENST00000288022 CNGB1Q14028 1251 aaPredicted RBP34.25■■■■□ 3.07
PDF-201ENST00000288022 TNS1Q9HBL0 1735 aaKnown RBP34.24■■■■□ 3.07
PDF-201ENST00000288022 ZEB1P37275 1124 aaPredicted RBP34.24■■■■□ 3.07
PDF-201ENST00000288022 RAPGEF4Q8WZA2 1011 aa34.2■■■■□ 3.07
PDF-201ENST00000288022 MEGF6O75095 1541 aa34.2■■■■□ 3.06
PDF-201ENST00000288022 APBA3O96018 575 aa34.18■■■■□ 3.06
PDF-201ENST00000288022 EN1Q05925 392 aaPredicted RBP34.17■■■■□ 3.06
PDF-201ENST00000288022 EIF4A2Q14240 407 aaKnown RBP34.17■■■■□ 3.06
PDF-201ENST00000288022 NPC1L1Q9UHC9 1359 aa34.17■■■■□ 3.06
PDF-201ENST00000288022 TATP17735 454 aaPredicted RBP34.16■■■■□ 3.06
PDF-201ENST00000288022 DDX54Q8TDD1 881 aaKnown RBP34.16■■■■□ 3.06
PDF-201ENST00000288022 SBF2Q86WG5 1849 aa34.16■■■■□ 3.06
PDF-201ENST00000288022 BCL9O00512 1426 aa34.14■■■■□ 3.06
PDF-201ENST00000288022 ZCRB1Q8TBF4 217 aaKnown RBP34.14■■■■□ 3.06
PDF-201ENST00000288022 EYA1Q99502 592 aa34.14■■■■□ 3.06
PDF-201ENST00000288022 BCL11BQ9C0K0 894 aaPredicted RBP34.09■■■■□ 3.05
PDF-201ENST00000288022 NCAPD2Q15021 1401 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms