RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
SEC24D-201ENST00000280551 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
SEC24D-201ENST00000280551 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
SEC24D-201ENST00000280551 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
SEC24D-201ENST00000280551 COG3Q96JB2 828 aa13.35□□□□□ -0.27
SEC24D-201ENST00000280551 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
SEC24D-201ENST00000280551 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
SEC24D-201ENST00000280551 FLT4P35916 1363 aa13.33□□□□□ -0.28
SEC24D-201ENST00000280551 PXDNQ92626 1479 aa13.33□□□□□ -0.28
SEC24D-201ENST00000280551 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
SEC24D-201ENST00000280551 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.28
SEC24D-201ENST00000280551 USP19O94966 1318 aa13.33□□□□□ -0.28
SEC24D-201ENST00000280551 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
SEC24D-201ENST00000280551 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
SEC24D-201ENST00000280551 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
SEC24D-201ENST00000280551 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
SEC24D-201ENST00000280551 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
SEC24D-201ENST00000280551 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
SEC24D-201ENST00000280551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC24D-201ENST00000280551 AAMPQ13685 434 aa13.29□□□□□ -0.28
SEC24D-201ENST00000280551 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
SEC24D-201ENST00000280551 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
SEC24D-201ENST00000280551 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
SEC24D-201ENST00000280551 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.287e-7■■□□□ 12.4
SEC24D-201ENST00000280551 OVOS2A0A0G2JMS6 1433 aa13.28□□□□□ -0.28
SEC24D-201ENST00000280551 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
SEC24D-201ENST00000280551 CRB1P82279 1406 aa13.28□□□□□ -0.28
SEC24D-201ENST00000280551 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
SEC24D-201ENST00000280551 ZNF428Q96B54 188 aa13.27□□□□□ -0.28
SEC24D-201ENST00000280551 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.28
SEC24D-201ENST00000280551 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
SEC24D-201ENST00000280551 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
SEC24D-201ENST00000280551 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.29
SEC24D-201ENST00000280551 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
SEC24D-201ENST00000280551 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
SEC24D-201ENST00000280551 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
SEC24D-201ENST00000280551 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
SEC24D-201ENST00000280551 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
SEC24D-201ENST00000280551 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
SEC24D-201ENST00000280551 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
SEC24D-201ENST00000280551 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
SEC24D-201ENST00000280551 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
SEC24D-201ENST00000280551 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
SEC24D-201ENST00000280551 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
SEC24D-201ENST00000280551 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 SKAP1Q86WV1 359 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 FBLN1P23142 703 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
SEC24D-201ENST00000280551 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
SEC24D-201ENST00000280551 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
SEC24D-201ENST00000280551 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
SEC24D-201ENST00000280551 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
SEC24D-201ENST00000280551 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
SEC24D-201ENST00000280551 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
SEC24D-201ENST00000280551 MSH6P52701 1360 aa13.21□□□□□ -0.29
SEC24D-201ENST00000280551 MAPK8IP3Q9UPT6 1336 aa13.21□□□□□ -0.29
SEC24D-201ENST00000280551 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
SEC24D-201ENST00000280551 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
SEC24D-201ENST00000280551 SALL2Q9Y467 1007 aaPredicted RBP13.21□□□□□ -0.29
SEC24D-201ENST00000280551 HOXC9P31274 260 aa13.21□□□□□ -0.3
SEC24D-201ENST00000280551 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
SEC24D-201ENST00000280551 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 MRC1P22897 1456 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 RIPK4P57078 832 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 GLI3P10071 1580 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
SEC24D-201ENST00000280551 PMFBP1Q8TBY8 1022 aa13.19□□□□□ -0.3
SEC24D-201ENST00000280551 AHDC1Q5TGY3 1603 aaPredicted RBP13.19□□□□□ -0.3
SEC24D-201ENST00000280551 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
SEC24D-201ENST00000280551 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
SEC24D-201ENST00000280551 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
SEC24D-201ENST00000280551 BCAR3O75815 825 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 CPDO75976 1380 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 RGS12O14924 1447 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
SEC24D-201ENST00000280551 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
SEC24D-201ENST00000280551 LTBP4Q8N2S1 1624 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
SEC24D-201ENST00000280551 IP6K1Q92551 441 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
SEC24D-201ENST00000280551 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
SEC24D-201ENST00000280551 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
SEC24D-201ENST00000280551 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
SEC24D-201ENST00000280551 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
SEC24D-201ENST00000280551 PLIN1O60240 522 aa13.16□□□□□ -0.3
SEC24D-201ENST00000280551 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
SEC24D-201ENST00000280551 CHL1O00533 1208 aa13.16□□□□□ -0.3
SEC24D-201ENST00000280551 GNAI1P63096 354 aa13.15□□□□□ -0.3
SEC24D-201ENST00000280551 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
SEC24D-201ENST00000280551 EYA1Q99502 592 aa13.15□□□□□ -0.3
SEC24D-201ENST00000280551 MS4A1P11836 297 aa13.14□□□□□ -0.31
SEC24D-201ENST00000280551 VAMP4O75379 141 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms